Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00457 ATGCCGCATAGAACGACTTACTTTTTTCCCAGGCAGTTTCCTGATCGCGGATTTGATTCGGCGTCAACCTCCAAACACATTTCGGATCACGAGAAGAAAATCAACAAAGACACTTTTAGTACTGAAAGCGACGCGAAACCGACCCCGCGGCCTGCGCGCGACTTTAGCGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGGCTCAAAGCAACAAGAAACTACCTGCTTTTTACGATTGGTTGGTGGATAAGAAAGCAACGCGATCGGCAACAGCTCACGTGAAAACTTGGCTTTCCAATTGCGACGAGGACCGCGAGCTCTTGCTTCCACCGCCTACCTCGGAGCCGGAGCATAATACAGCGTCGGTTAAGGATTGGAGTGTTGACCGGAACTTTGACCGGCAAGTTTCACTGCCTAGAGTATCAAGCGGGAGTAGCTATGCCGGGAGTTTGTTTTCAGGCACGGGAACGGGGACAGTGGATGGAAACTTTTCCAGCGATGTCAAGGATTCATCTGCGTCCAAGATATTGTCCTCGCACACGGCAAGGCCGGAAGAGATTGAGGTTGGAGATGGTAACGAAAGCATAGCAAAGAAAGCTAAAGAGAGTTATTACCTGCAACTTGCTTTGGCTGCCACGCTTCGTTCCCATGCTAGCCTCGCTGGCGATCCTGTGCTTCTGGAGGAAGGCAGGGTGGAAATTGCGGACGCTGAAACTGTTTCTTATCGACTTTGGGTAAGTGGTTGCCTGTCTTACTCCGACAAAATATCAGACGGATTCTACAATATTTTGGGTATGAACCCGTATCTCTGGGTTATGTGCAATGGTTTTGAGGAAGGTAGACGGTTACCTCCTCTGATGTCGCTTAGAACCATTGAACCAAGTGAGACGTCAATGGAGGTGATTCTTGTTGATAGACGTGGGGACTCTCGACTGAAAGAACTTGAAGACAAAGCACAAGAACTATATTGTGCTTCCGAGAGCACCTTAATGTTAGTGGAGAAACTAGGAAAGCTTGTTGCGATCTACATGGGGGGAACTTTTCCGGTGGAGCAAGGGGGGTTGCACCTCCATTGGAAAGTGGTGAGCAAAAGATTGAGGGACTTCCAGAAATGCATTGTTCTTCCTATTGGTAGTCTTTCTATGGGACTATGTAGGCACCGTGCAATCCTTTTCAAGAAATTGGCAGATTATATAGGCTTGCCATGTCGGATAGCTAAAGGTTGCAAGTACTGTGTTGCGGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGCAACCAGGAAATGTACATGGTCCAGATTCCTCAATTAATGGAGGGTTTCAATCTTCAATTCCTTCACCGCTCCACATTTCTCATTTAAAAGAGTTTCAAGAACCTTATGTGGAAAGTTATTTCCGTCATCAAACTGTTGGGTCGAAGCAAATCGGTGGGTTGCCTGAAAATCCTCTACGTTCAGGTTTTGGAGAGCACCAGATGAAAGGGGGAAGCACTTTGCATAGAAGTTCAGGGGCTGAAATTGATAAATTGGTTGATCAAGCTCCTATGAGTATGAGATCATCTCAGCTGCGTGTGGAAACAAAAGTGAGCAAGGAGTGTGTGCTTAAGAATCAAATAATGCCATCCGCTGATGCCAACGGCTGTGAGGTGTTGGGTTCTATTGGTGGTGCATCTTTATGTGAAAACAAAGTTGTCATTGAAGAAATATACCAACAAGAGGATGTTGTTGCGGGAATTTCACTAAATGAAACTAGCATTGATCTGTCCAAATTAAGCTTGTCAACTCAAACTGATTCAAAAGAGGTTGAGGGTAGGTCTCAAAATTGTTCAGCATCAACATATCCAAAATATCTAACACTTGAACCATCACTTGCAATGGATTGGCTGGAAATTTCATGGGACGAATTACATATAAAGGAGCGTGTTGGAGCTGGCTCATTTGGTACTGTGCACCGTGCTGAATGGCATGGATCGGTTGCGATAATGAAGCGGGTGCGCCATCCGAATGTGGTACTCTTCATGGGTGCAGTTACAAAGCGACCTCATCTTTCAATAGTGACCGAGTATCTGCCCAGGGGTAGTCTATACCGTCTAATCCATCGGCCATCTTCTAGTGAATTGATGGATCAAAGGAAACGATTGCGCATGGCGTTGGATGTGGCGAAGGGAATCAACTACCTACATTGTCTCAATCCTCCTATAGTACACTGGGATCTTAAATCCCCTAACTTGTTGGTTGACAAAAATTGGACGGTCAAGGTTTGTGATTTTGGGTTATCCAGATTCAAAGCAAACACTTTCATATCATCAAAATCTGTTGCTGGAACGCCCGAGTGGATGGCTCCAGAATTCCTTCGTGGAGAGCCTTCGAATGAGAAGTCCGATGTCTACAGTTTTGGGGTGATCCTCTGGGAACTAGTAACCATGCAACAACCATGGAGTGGGCTTGGCCCGGCTCAGGTTGTGGGAGCTGTCGCTTTCCAGAATAGAAGGCTTTCTATCCCATCAAGTACTTCTCCATTGTTGGCTTCCCTAATTGAATCTTGCTGGGCAGACGATCCTGCTCAACGTCCATCCTTCACAAGCATAGTTGACTCCCTAAAGAAATTGCTTAAATCTCCACAGCAATTGATAGCAATGGGTGCAACGTGA 2709 46.03 MPHRTTYFFPRQFPDRGFDSASTSKHISDHEKKINKDTFSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKAQSNKKLPAFYDWLVDKKATRSATAHVKTWLSNCDEDRELLLPPPTSEPEHNTASVKDWSVDRNFDRQVSLPRVSSGSSYAGSLFSGTGTGTVDGNFSSDVKDSSASKILSSHTARPEEIEVGDGNESIAKKAKESYYLQLALAATLRSHASLAGDPVLLEEGRVEIADAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNGFEEGRRLPPLMSLRTIEPSETSMEVILVDRRGDSRLKELEDKAQELYCASESTLMLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLRDFQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIAKGCKYCVADHRSSCLVKIEDDKKSLREYVVDLVGQPGNVHGPDSSINGGFQSSIPSPLHISHLKEFQEPYVESYFRHQTVGSKQIGGLPENPLRSGFGEHQMKGGSTLHRSSGAEIDKLVDQAPMSMRSSQLRVETKVSKECVLKNQIMPSADANGCEVLGSIGGASLCENKVVIEEIYQQEDVVAGISLNETSIDLSKLSLSTQTDSKEVEGRSQNCSASTYPKYLTLEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSSELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRRLSIPSSTSPLLASLIESCWADDPAQRPSFTSIVDSLKKLLKSPQQLIAMGAT 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2662617 2672728 - Cp4.1LG06g04020.1 Cpe06g00457 471237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00457 902 PRINTS Tyrosine kinase catalytic domain signature 813 835 IPR001245 GO:0004672|GO:0006468
Cpe06g00457 902 PRINTS Tyrosine kinase catalytic domain signature 706 719 IPR001245 GO:0004672|GO:0006468
Cpe06g00457 902 PRINTS Tyrosine kinase catalytic domain signature 747 765 IPR001245 GO:0004672|GO:0006468
Cpe06g00457 902 PRINTS Tyrosine kinase catalytic domain signature 857 879 IPR001245 GO:0004672|GO:0006468
Cpe06g00457 902 MobiDBLite consensus disorder prediction 492 522 - -
Cpe06g00457 902 Gene3D Transferase(Phosphotransferase) domain 1 714 898 - -
Cpe06g00457 902 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 678 901 - -
Cpe06g00457 902 SMART serkin_6 655 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe06g00457 902 Gene3D Phosphorylase Kinase; domain 1 680 713 - -
Cpe06g00457 902 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 678 901 - -
Cpe06g00457 902 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 109 677 - -
Cpe06g00457 902 ProSitePatterns Protein kinases ATP-binding region signature. 661 682 IPR017441 GO:0005524
Cpe06g00457 902 Pfam Ethylene-responsive protein kinase Le-CTR1 241 449 - -
Cpe06g00457 902 MobiDBLite consensus disorder prediction 22 40 - -
Cpe06g00457 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 753 765 IPR008271 GO:0004672|GO:0006468
Cpe06g00457 902 Gene3D Phosphorylase Kinase; domain 1 642 679 - -
Cpe06g00457 902 MobiDBLite consensus disorder prediction 19 57 - -
Cpe06g00457 902 CDD STKc_MAP3K-like 661 886 - -
Cpe06g00457 902 ProSiteProfiles Protein kinase domain profile. 655 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe06g00457 902 SUPERFAMILY Protein kinase-like (PK-like) 629 885 IPR011009 -
Cpe06g00457 902 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 109 677 - -
Cpe06g00457 902 Pfam Protein tyrosine and serine/threonine kinase 678 886 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00479 Cpe06g00457 CCT
Cpe02g00479 Cpe06g00457 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00237 Cpe-Chr3:1177932 Cpe06g00457 Cpe-Chr6:2662617 4.50E-11 dispersed
Cpe06g00457 Cpe-Chr6:2662617 Cpe08g01046 Cpe-Chr8:7996171 1.25E-154 dispersed
Cpe20g00145 Cpe-Chr20:821271 Cpe06g00457 Cpe-Chr6:2662617 1.84E-148 transposed
Cpe02g00479 Cpe-Chr2:2721160 Cpe06g00457 Cpe-Chr6:2662617 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62468 PF07714 PK_Tyr_Ser-Thr 1.60E-52 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00457 - - csv:101204522 1653.65