Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe06g00552 | ATGGCGGACTTCAAGCTTCACCGTCTTCTTCCCGCTTTTCTCGTTCTGTTTCTTCTACTTGTTCCTTCTGTGATTGCTGCAGGCTGCCAATGTCCTGAACAAGAAGAAGAAGAAGACGGAGGCGTTCGAAACAAAACCCTAGCCCTCAAATACAAAATCGTCGCCATAGCTACGATTCTTCTCGCTGGAATCCTTGGGGTGTTTATTCCCTTACTCGGGAGGGCATTGCCGGCCTTGAGTCCGGACAAGGATATTTTCTTTGTCGTTAAAGCCTTCGCGGCTGGTGTCATATTGGCCACCGGATTCATCCACGTCCTTCCTGATGCCTACGAGAATCTGACGTCGCCGAAACTGAAACAGAATCCTTGGGCGAAGTTTCCGTTCACCGGCTTGGTGTCTATGGTGGCTGCCATTGCCACTTTGATGGTGGACGCCGGTGCCAGTTCTTATTTCACTCGACTGAATCTGAATAAGCCTCAGCCTGAGACGGACGGCGATGGAGAGATGCATCCTGCATGTCACGCTCATGCCTCTGCCAAAGTCGTCGGATCATCCACGGAGATTCTCCGGCACCGGGTGATCTCTCAGGTACTAGAGCTTGGAATTGTGGTACATTCGGTAATTATAGGGATTGGTATGGGTGTTTCTGAGACTCCAAGTACAATAAAACCTCTTGTGGCGGCCATCACTTTTCATCAGTTATTTGAAGGTATGGGCCTCGGAGGATGCATCGCCCAGGCAAAGCTCAGAACCAGGGCAGCGGTGATAATGGCAGTTTTCTTCTGCCTCACAACGCCAATTGGGATAGCAATAGGCATTGGAGTAACCAACAGCTACGACGAGGATAGCCCAAAAGCACTCATAGTTGAGGGGATTCTGAATGCAGCCTCCGCTGGTATCTTAATGTATATGGCTCTTGTGGACTTTCTGGCTGCTGATTTTATGAGCCTTAGAATGCAGAGCAATGCAAAGCTTCAATTCTTTGCCAATGTTGCTCTTATTCTTGGTGCTGCTTTGATGTCTTTACTTGCCATATGGGCTTGA | 1044 | 49.14 | MADFKLHRLLPAFLVLFLLLVPSVIAAGCQCPEQEEEEDGGVRNKTLALKYKIVAIATILLAGILGVFIPLLGRALPALSPDKDIFFVVKAFAAGVILATGFIHVLPDAYENLTSPKLKQNPWAKFPFTGLVSMVAAIATLMVDAGASSYFTRLNLNKPQPETDGDGEMHPACHAHASAKVVGSSTEILRHRVISQVLELGIVVHSVIIGIGMGVSETPSTIKPLVAAITFHQLFEGMGLGGCIAQAKLRTRAAVIMAVFFCLTTPIGIAIGIGVTNSYDEDSPKALIVEGILNAASAGILMYMALVDFLAADFMSLRMQSNAKLQFFANVALILGAALMSLLAIWA | 347 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 3318109 | 3319152 | + | Cp4.1LG06g05480.1 | Cpe06g00552 | 471332 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe06g00552 | 347 | PANTHER | ZINC/IRON TRANSPORTER | 18 | 347 | - | - | |
| Cpe06g00552 | 347 | PANTHER | ZINC TRANSPORTER 1 | 18 | 347 | - | - | |
| Cpe06g00552 | 347 | Pfam | ZIP Zinc transporter | 157 | 344 | IPR003689 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 | |
| Cpe06g00552 | 347 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 29 | - | - | |
| Cpe06g00552 | 347 | TIGRFAM | zip: ZIP zinc/iron transport family | 37 | 347 | IPR004698 | GO:0005385|GO:0016021|GO:0071577 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe02g00634 | Cpe-Chr2:3859647 | Cpe06g00552 | Cpe-Chr6:3318109 | 1.29E-179 | dispersed | |
| Cpe04g00867 | Cpe-Chr4:7958308 | Cpe06g00552 | Cpe-Chr6:3318109 | 3.72E-124 | dispersed | |
| Cpe05g00976 | Cpe-Chr5:6364201 | Cpe06g00552 | Cpe-Chr6:3318109 | 1.73E-80 | dispersed | |
| Cpe06g00552 | Cpe-Chr6:3318109 | Cpe09g00693 | Cpe-Chr9:6137273 | 2.19E-113 | dispersed | |
| Cpe06g00809 | Cpe-Chr6:5174903 | Cpe06g00552 | Cpe-Chr6:3318109 | 8.22E-11 | dispersed | |
| Cpe20g00605 | Cpe-Chr20:3697180 | Cpe06g00552 | Cpe-Chr6:3318109 | 3.95E-11 | dispersed | |
| Cpe06g00550 | Cpe-Chr6:3309078 | Cpe06g00552 | Cpe-Chr6:3318109 | 2.41E-144 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe06g00552 | K14709 | - | csv:101215851 | 503.827 |