Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00589 ATGGGCTTCTATACGGTAAAATGTCAATGGCTACTGATTCTTCACATTGTTCCGCTTTGCTTCATAATGAGCAGAAGCAGTGGCATCAGTTCTGATGGTGAGGCACTTTTGAGCTTCAGAGCAGCAATTCTTGATTCTGATGGTGTTCTTCTTCAATGGAAGCCAGAGGCACGCCATCCTTGTAAATGGAAAGGAGTAACGTGTGATCCAAAAACTAAGAGAGTGATATATCTGAGTCTTCCTTATCACAAACTTAGTGGATCGTTATCCCCTGAACTTGGAAAGCTTGATCAACTAAAAGTTTTAGCTCTTCATGACAATAACTTTTATGGGACAATTCCATCAGAATTAGGGAATTGCTTACAGTTGCAGGGAATGTTCCTGCAGGGTAATTATTTTAGTGGGTTCATTCCCAATGAATTGGGGAATCTTTCAGCACTTCTAAATTTAGATATTTCAAGTAACTCACTCGGTGGAAATATTCCCATCTCGCTTGGGAAGCTGAGCAAGCTTATTACTCTAAATGTTTCTGCCAATTTTCTGGTTGGATCAATACCAAACGTTGGCGTGCTAATCAACTTCTCCGAAAGTTCGTTTCTTGGAAACCGTGGCTTGTGCGGGAAGCAAATCAATGTTATGTGCAAACATGACAAGGAGGGACCAGGAAGAAATGAGTCACCATTCTCAGTGCAAAGTCAAATTGAGAGGAAGAAGTACTCTGGCCGACTACTTATAAGTGCTTCGGCAACTGTGGGTGCTTTGCTGTTGGTTGCCCTAATGTGTTTCTGGGGTTGCTTTATGTATAAAAAGTTCGGCAAAAATGACAATAAAGGGCAAGTGCTCGATGTTTGTGGAGGTGCATCGGGTGTAATGTTTCACGGAGACTTGCCATACTCATCTAAAGATATTATTAAGAAATTTGAGACATTGAATGAAGAACACATAATAGGATGTGGGGGCTTTGGAACGGTGTACAAGCTTGCAATGGATGATGGCAATGTTTTTGCCTTGAAGAGAATTGTAAAATTGAATGAGGGCTTTGATCGATTTTTTGAGAGGGAGCTTGAAATCCTTGGAAGCATAAAACACAGGTTCCTTGTGAATTTGCGAGGATATTGCAAGTCTCCTACATCAAAGCTGTTAATTTATGATTTCCTTTCTGGAGGCAGCCTTGATGAGGCACTACACGAGTATATGCAAAGTGGTAGAGCTACTGAAAAGACTGATGTGTACAGTTTTGGAGTATTGGTACTTGAAGTGATGAGTGGCAAACGTCCCACAGATGCATCATTCATTGAGAAGGGGCTAAACATTGTTGGTTGGATTAATCCCTATATGCTGAGAAAGACAAGAGAAGATAGCCATGCCAATGAAGCCATAGAACCTTAA 1389 41.04 MGFYTVKCQWLLILHIVPLCFIMSRSSGISSDGEALLSFRAAILDSDGVLLQWKPEARHPCKWKGVTCDPKTKRVIYLSLPYHKLSGSLSPELGKLDQLKVLALHDNNFYGTIPSELGNCLQLQGMFLQGNYFSGFIPNELGNLSALLNLDISSNSLGGNIPISLGKLSKLITLNVSANFLVGSIPNVGVLINFSESSFLGNRGLCGKQINVMCKHDKEGPGRNESPFSVQSQIERKKYSGRLLISASATVGALLLVALMCFWGCFMYKKFGKNDNKGQVLDVCGGASGVMFHGDLPYSSKDIIKKFETLNEEHIIGCGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRFLVNLRGYCKSPTSKLLIYDFLSGGSLDEALHEYMQSGRATEKTDVYSFGVLVLEVMSGKRPTDASFIEKGLNIVGWINPYMLRKTREDSHANEAIEP 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3606362 3613311 + Cp4.1LG06g05910.1 Cpe06g00589 471369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00589 462 SUPERFAMILY Protein kinase-like (PK-like) 294 434 IPR011009 -
Cpe06g00589 462 Gene3D Transferase(Phosphotransferase) domain 1 382 461 - -
Cpe06g00589 462 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Cpe06g00589 462 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 396 - -
Cpe06g00589 462 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 397 448 - -
Cpe06g00589 462 ProSitePatterns Protein kinases ATP-binding region signature. 316 342 IPR017441 GO:0005524
Cpe06g00589 462 Gene3D Phosphorylase Kinase; domain 1 286 381 - -
Cpe06g00589 462 ProSiteProfiles Protein kinase domain profile. 310 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe06g00589 462 SUPERFAMILY L domain-like 29 190 - -
Cpe06g00589 462 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 2 37 396 - -
Cpe06g00589 462 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 2 397 448 - -
Cpe06g00589 462 Gene3D Ribonuclease Inhibitor 29 216 IPR032675 -
Cpe06g00589 462 Pfam Protein kinase domain 312 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00591 Cpe06g00589 CCT
Cpe01g00528 Cpe06g00589 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00528 Cpe-Chr1:3031762 Cpe06g00589 Cpe-Chr6:3606362 4.12E-22 dispersed
Cpe06g00536 Cpe-Chr6:3201477 Cpe06g00589 Cpe-Chr6:3606362 2.35E-44 dispersed
Cpe06g00589 Cpe-Chr6:3606362 Cpe18g00805 Cpe-Chr18:7509306 1.92E-103 dispersed
Cpe02g00591 Cpe-Chr2:3536733 Cpe06g00589 Cpe-Chr6:3606362 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62476 PF00069 Pkinase 7.00E-11 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00589 - - cpep:111797176 805.438