Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00603 ATGGCGGCAGCGCTCGGTGGAGGTAGTGGTACCGGAGGCGGATTGATGTTCGGCAGTGGGGATGTGTCGAAGGCGCACGCGGCTATGGCTTTGGTGCAATTAATCAATGGAGGTTATCATGTTATCACCAAAGTCGCCCTTAATGTTGGGATGAATCAACTCGTCTTTTGTTTGTTCCGCGACTTGTTGGCTCTCACGATTCTTGCCCCTGTTGCTTATGTTCGGGAGAAGCGAGTTCGTTTGCCCATGACTCGAGAACTCTTCATATCGTTTTTCATTCTTGGTTTAACTGGGATTTTTGGTAACCAGCTTCTCTTTCTTGTTGGACTTGGCTACACTAATCCAACTTATGCTGCTGCCATACAGCCTTCCATTCCAGTTTTTACATTCCTTTTGGCTGTTATGATGGGCACAGAGTCTGTGAACTTACTCAAAGTGGAAGGACAGGCAAAGGTTGGCGGTACACTCGTTTGTGTCTCTGGTGCCATATTTATGGTTTTATTCCGTGGTCCAGCTTTGTTTGGAAACCCTGAATCTGATTTCACCTCGCATAACGAAATAAGTGCAAGGGGTCAACCAGAGCCTGCCGGATGGCTATTGTCTAGCCTTCTGGAGTATGGATTGGATCATTTTCATATTGGGGTATTATGCTTGATAGGGAACTGTATGTGCATGGCTTGTTTCTTGGCTATCCAGGCACGGGTGTTAAAGAAGTATCCTGCCAACTTATCGGTCACGGCATATTCTTATTTATTTGGTGCTACATTGATGGTGATCACATCTTTCTTCATGACCAATGAATCCACTGACTGGAATTTGACGCAATCAGAGTTTTTCGCTGTCCTTTATGCTGGAATTTTTGCATCTGCCATCAATTATGGACTCTTGACATGGTGCAATAAGATATTGGGGCCTGCATTGGTCGCTCTTTACAACCCACTTCAACCTGCAGCATCTGCGCTGCTATCAAGAGTTTTCATAGGAAGCCCTATTTATCTTGGAAGTGTTTTGGGGGGCTCTCTTATAATTGGTGGTCTTTATTTGGTTACTTGGGCGTCACATAGGGAACGACAAACAACTCCAATTTTGCTTCCACATTCAACCAGGTCCTCTGAACCACTTATTCATAAAGATGCATTGACTAACAAGATTGCATATCAGATAGGACAGATTTTCTCAGGCTCTACATCTTCACCCAAATCTGTAGATTAG 1212 44.55 MAAALGGGSGTGGGLMFGSGDVSKAHAAMALVQLINGGYHVITKVALNVGMNQLVFCLFRDLLALTILAPVAYVREKRVRLPMTRELFISFFILGLTGIFGNQLLFLVGLGYTNPTYAAAIQPSIPVFTFLLAVMMGTESVNLLKVEGQAKVGGTLVCVSGAIFMVLFRGPALFGNPESDFTSHNEISARGQPEPAGWLLSSLLEYGLDHFHIGVLCLIGNCMCMACFLAIQARVLKKYPANLSVTAYSYLFGATLMVITSFFMTNESTDWNLTQSEFFAVLYAGIFASAINYGLLTWCNKILGPALVALYNPLQPAASALLSRVFIGSPIYLGSVLGGSLIIGGLYLVTWASHRERQTTPILLPHSTRSSEPLIHKDALTNKIAYQIGQIFSGSTSSPKSVD 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3715739 3720114 + Cp4.1LG06g06010.1 Cpe06g00603 471383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00603 403 PANTHER WAT1-RELATED PROTEIN 23 395 IPR030184 GO:0016021|GO:0022857
Cpe06g00603 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 356 - -
Cpe06g00603 403 PANTHER WAT1-RELATED PROTEIN 23 395 - -
Cpe06g00603 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 168 - -
Cpe06g00603 403 Pfam EamA-like transporter family 213 350 IPR000620 GO:0016020|GO:0016021
Cpe06g00603 403 Pfam EamA-like transporter family 29 148 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00548 Cpe06g00603 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00085 Cpe-Chr6:424900 Cpe06g00603 Cpe-Chr6:3715739 5.28E-50 dispersed
Cpe06g00603 Cpe-Chr6:3715739 Cpe11g00228 Cpe-Chr11:1217523 6.24E-57 dispersed
Cpe06g00603 Cpe-Chr6:3715739 Cpe07g00390 Cpe-Chr7:2529138 6.61E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00603 - - csv:101222886 709.909