Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00604 ATGCAGCTATATCATCATCCGTTCTCATTGAACAGCCAGAAGGTGAGACTCGCCTTGGAAGAGCAAGGCATCGATTACACGTCGTTTCATGTCAATCCTATCACGGCGAAGAACATGGACGCCTCGTTCTTCAAGATGAACTCAAATGCAAAACTTCCCGTCTTTCAAAACGGTTCCCATGTCATTTTCGACACCATCGAGATAATTCAGTATATAGAAAGAATTGCCATTGTCTCCTCGGGGATCGATGACGTAATGCCGAGTAGTCGAGAAGTTGTTGAATGGATGCATAAGATACAAGAATGGAATCCAAAATTTTTCACTCTTGCCCACATCCCCGAGAAGTACCGTCTCGCTGTTACCAAATTTAGAAGGCGGGTAGTGATCGCTCGGATGGCCGAAACTCCCGAAATGGCTGCTACTTACCATCATAAGCTCCGAGAAGCATACGAGACTGAAGACAAATTGAAAAACAAAACCGTTATCAAACAAAGCACGGAACATCTAGTTGCACTTCTTGATGAAATCGAGTCGAAACTAGGCCAAACGTCTTACTTGGTAGGGGAAGAGTTTACCATGGCCGATGCCGTGTTCATACCCGTGCTGGCTCGGCTCGTTCTGTTGAAGCTGGCCGACGAGTACATCGGTAGCAGACCGAACATTGCAGAGTATTGGATGTTGGTGCAGCAGAGACCAAGCTACAAGAAGGTGATTGGGAAGTACTTCAATGGATGGAGAAAGCATAAAACACTTCTGAAAACTTGGTGTTTTGTTCATATCAGAACCTTGCTGAGGAGATATTGA 804 45.27 MQLYHHPFSLNSQKVRLALEEQGIDYTSFHVNPITAKNMDASFFKMNSNAKLPVFQNGSHVIFDTIEIIQYIERIAIVSSGIDDVMPSSREVVEWMHKIQEWNPKFFTLAHIPEKYRLAVTKFRRRVVIARMAETPEMAATYHHKLREAYETEDKLKNKTVIKQSTEHLVALLDEIESKLGQTSYLVGEEFTMADAVFIPVLARLVLLKLADEYIGSRPNIAEYWMLVQQRPSYKKVIGKYFNGWRKHKTLLKTWCFVHIRTLLRRY 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3721406 3725158 + Cp4.1LG06g06000.1 Cpe06g00604 471384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00604 267 SUPERFAMILY GST C-terminal domain-like 136 241 IPR036282 -
Cpe06g00604 267 CDD GST_N_family 1 73 - -
Cpe06g00604 267 SFLD Main (cytGST) 1 231 - -
Cpe06g00604 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 118 251 IPR010987 -
Cpe06g00604 267 Gene3D - 126 238 - -
Cpe06g00604 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Cpe06g00604 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Cpe06g00604 267 Gene3D Glutaredoxin 1 75 - -
Cpe06g00604 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Cpe06g00604 267 CDD GST_C_family 147 225 - -
Cpe06g00604 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Cpe06g00604 267 Pfam Glutathione S-transferase, C-terminal domain 161 210 - -
Cpe06g00604 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00572 Cpe06g00604 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00604 Cpe-Chr6:3721406 Cpe07g00339 Cpe-Chr7:2214690 4.31E-12 dispersed
Cpe02g00572 Cpe-Chr2:3411111 Cpe06g00604 Cpe-Chr6:3721406 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00604 K22077 - csv:101222476 481.485