Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00619 ATGGTGGAGAGAGCGGTGTTCGACGGAGAAGCGGCGGAGAGAGTGGTGGCGGAGCTGAGGGAGAGCTATAATTCCGGGAAGACGCGAAGCTACGAATGGAGAGTGAATCAATTGAAGAATCTGTTGAAATTGATTGAAGAAAACGAGGAAGAGATGGTCGATAAGATCCATTCGGATCTTCATAAACCCGAACCCGAAACCTTCACCCATGAGGTAGGTCTGTTAAAAAATTCGTGTCAATTGGCACTTAAAGAACTTAGGCATTGGATGGCACCAGAAAAGGTTAAAACTTCCATTACCATATTTCCTTCGTCTGCTGCAATTGTACCAGAACCTTTGGGTGTTGTCCTGATTATTTCAGCCTGGAATTATCCATACTTGGTATCTCTTGATCCAGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCGGAAATTTCCCCATCGACATCATCTTTAATGGCTAAACTTTTAGGGAAGTATTTGGATACTTCTGCTGTAAGAGTTGTTGAGGGTGCTGTTCCCGAAACTTCTGCTTTGCTTGAGCAAAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTAGGGCGAATAGTGATGGCAGCTGCTGCCAAGCACCTTACGCCAGTTGTACTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCAGAAATCAATTTACAAGTTGCGAGTAGGCGGATTATTTCTGGTAAGTGGGGTTGCAACAATGGACAAGCATGCGTTGCTCCTGATTATGTTATAACTACCAAAGAATTTGCTCCGAAGTTGGTGGAGTCCCTGAAACAAGAACTGGAGAGATTTTATGGAAAGAATCCATTGGAATCTAAAGATTTATCTCGCATTGTGAATGCTTACCACTTTGATCGCTTGATTAAACTCTTAGAGGAGGATAAAATTTCTGGCAAGATTGTGCATGGTGGTGAAAAGGACAAATCCAAATTAACACAATCTTTTTCTTGCCTTAATTTTGGGCTGGAGCAGGTCGACAAAGTGGAGGACAGCTTTGAAGTAGTCAACTCGGGCGCGAAGCCACTTGCAGCATATTTATTTACCAACAATAAGAAGCTCAAGGAACGGTTCGTGGCTTGTATCTCTGCAGGGGCCATAGGCATCAATGATACCGCCTTACAGCTGTCGGTTAACACGCTACCATTCGGAGGAGTTGGGGAGAGCGGAATGGGAGCTTACCATGGGAAGTTCTCATTTGATGCATTTAGCCATAAAAAGGCTGTTCTTTATCGAATTTTCGCAGGCGACGTGCCGATGAGATACCCGCCTTACTCAAAGGAAAAGTTACGATTTCTGAAAGCTCTTCTCGGAGGTAGCCTATTGGAACTCATTCGTGCTCTTCTTGGTTGGTAG 1401 44.04 MVERAVFDGEAAERVVAELRESYNSGKTRSYEWRVNQLKNLLKLIEENEEEMVDKIHSDLHKPEPETFTHEVGLLKNSCQLALKELRHWMAPEKVKTSITIFPSSAAIVPEPLGVVLIISAWNYPYLVSLDPVVGAIAAGNAVVLKPSEISPSTSSLMAKLLGKYLDTSAVRVVEGAVPETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVASRRIISGKWGCNNGQACVAPDYVITTKEFAPKLVESLKQELERFYGKNPLESKDLSRIVNAYHFDRLIKLLEEDKISGKIVHGGEKDKSKLTQSFSCLNFGLEQVDKVEDSFEVVNSGAKPLAAYLFTNNKKLKERFVACISAGAIGINDTALQLSVNTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRIFAGDVPMRYPPYSKEKLRFLKALLGGSLLELIRALLGW 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3823714 3830866 - Cp4.1LG06g06260.1 Cpe06g00619 471399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00619 466 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491
Cpe06g00619 466 Coils Coil 35 55 - -
Cpe06g00619 466 Pfam Aldehyde dehydrogenase family 8 326 IPR015590 GO:0016491
Cpe06g00619 466 Pfam Aldehyde dehydrogenase family 340 424 IPR015590 GO:0016491
Cpe06g00619 466 PANTHER ALDEHYDE DEHYDROGENASE 3 466 - -
Cpe06g00619 466 PIRSF ALDH 336 461 IPR012394 GO:0006081
Cpe06g00619 466 PIRSF ALDH 2 335 IPR012394 GO:0006081
Cpe06g00619 466 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 326 IPR016163 GO:0016620
Cpe06g00619 466 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 340 404 IPR016163 GO:0016620
Cpe06g00619 466 PANTHER ALDEHYDE DEHYDROGENASE 3 466 IPR012394 GO:0006081
Cpe06g00619 466 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 405 422 IPR016162 GO:0016491
Cpe06g00619 466 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 220 IPR016162 GO:0016491
Cpe06g00619 466 SUPERFAMILY ALDH-like 13 440 IPR016161 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00556 Cpe06g00619 CCT
Cpe02g00556 Cpe06g00619 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00556 Cpe-Chr2:3321380 Cpe06g00619 Cpe-Chr6:3823714 0 dispersed
Cpe06g00619 Cpe-Chr6:3823714 Cpe14g00552 Cpe-Chr14:3505085 3.45E-144 dispersed
Cpe06g00618 Cpe-Chr6:3815540 Cpe06g00619 Cpe-Chr6:3823714 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00619 K00128 - csv:101219329 736.487