Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe06g00629 | ATGATGAAACAGGTGCTCTATAATTTCTCTTTTACAGGCATGGGTGCTGCTTATGGGACTGCAAAGAGTGGAGTTGGAGTGGCCTCCATGGGAGTTATGAGGCCAGAGCTTGTCATGAAATCTATAGTTCCTGTTGTTATGGCTGGAGTGTTGGGTATTTATGGATTGATCATTGCTGTTATTATTAGTACCGGAATAAACCCGAAAGCGAAATCGTACTATTTGTTTGATGGTTATGCTCATCTGTCTTCTGGACTTGCTTGTGGACTTGCTGGTCTCTCTGCTGGAATGGCAATTGGGATTGTTGGTGATGCTGGCATGGGTGCTGCTTATGGGACTGCAAAGAGTGGAGTTGGAGTGGCCTCCATGGGAGTTATGAGGCCAGAGCTTGTCATGAAATCTATAGTTCCTGTTGTTATGGCTGGAGTGTTGGGTATTTATGGATTGATCATTGCTGTTATTATTAGTACCGGAATAAACCCGAAAGCGAAATCGTACTATTTGTTTGATGGTTATGCTCATCTGTCTTCTGGACTTGCTTGTGGACTTGCTGGTCTCTCTGCTGGAATGGCAATTGGGATTGTTGGTGATGCTGGTGTTCGGGCCAATGCACAACAACCTAAGCTCTTTGTTGGAATGATTCTCATCCTCATCTTCGCCGAAGCTCTCGCCCTCTACGGTCTCATTGTTGGTATCATTCTTTCCTCTCGAGCAGGCCAATCCCGTGCAGATTAA | 735 | 45.31 | MMKQVLYNFSFTGMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD | 244 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3901365 | 3903857 | + | Cp4.1LG06g06320.1 | Cpe06g00629 | 471409 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe06g00629 | 244 | CDD | ATP-synt_Vo_c_ATP6C_rpt1 | 11 | 66 | - | - | |
Cpe06g00629 | 244 | Gene3D | - | 107 | 241 | IPR035921 | - | |
Cpe06g00629 | 244 | Gene3D | - | 4 | 106 | IPR035921 | - | |
Cpe06g00629 | 244 | Pfam | ATP synthase subunit C | 103 | 155 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Cpe06g00629 | 244 | Pfam | ATP synthase subunit C | 11 | 62 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Cpe06g00629 | 244 | Pfam | ATP synthase subunit C | 176 | 234 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Cpe06g00629 | 244 | SUPERFAMILY | F1F0 ATP synthase subunit C | 73 | 156 | IPR035921 | - | |
Cpe06g00629 | 244 | CDD | ATP-synt_Vo_c_ATP6C_rpt1 | 107 | 159 | - | - | |
Cpe06g00629 | 244 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 186 | 212 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Cpe06g00629 | 244 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 213 | 236 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Cpe06g00629 | 244 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 109 | 133 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Cpe06g00629 | 244 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 135 | 159 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Cpe06g00629 | 244 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 9 | 108 | - | - | |
Cpe06g00629 | 244 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 107 | 244 | - | - | |
Cpe06g00629 | 244 | TIGRFAM | V_ATP_synt_C: V-type ATPase, C subunit | 10 | 106 | IPR011555 | GO:0033179|GO:0046961|GO:1902600 | |
Cpe06g00629 | 244 | TIGRFAM | V_ATP_synt_C: V-type ATPase, C subunit | 106 | 200 | IPR011555 | GO:0033179|GO:0046961|GO:1902600 | |
Cpe06g00629 | 244 | SUPERFAMILY | F1F0 ATP synthase subunit C | 166 | 235 | IPR035921 | - | |
Cpe06g00629 | 244 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT C2 | 9 | 108 | - | - | |
Cpe06g00629 | 244 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT C2 | 107 | 244 | - | - | |
Cpe06g00629 | 244 | CDD | ATP-synt_Vo_c_ATP6C_rpt2 | 168 | 235 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe06g00629 | Cpe-Chr6:3901365 | Cpe07g00379 | Cpe-Chr7:2450787 | 3.21E-62 | dispersed | |
Cpe02g00544 | Cpe-Chr2:3249150 | Cpe06g00629 | Cpe-Chr6:3901365 | 2.27E-62 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe06g00629 | K02155 | - | thj:104806903 | 242.276 |