Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00635 ATGGGTGCTGACACTGGCCTTGCTATGTTTTGTGGTCTCATTCATAAAATCAAACCCTACTTAGCTATGATCTCCTTGCAATTCGGCTACGCCGGGATGTACATCGTTACCATGCTTTGTTTTAAAAAGGGTATGAACCATTACGTTCTTGCGGTGTATCGACACGTCGTTGCTACCATTGTCATTGCTCCGTTCGCTTTCGTCCTCGAAAGGAAAATAAGGCCGAAGATGACATTCCCGATCCTCGCTCGGATATTGGCGCTCGGCTTTCTCGAGCCTGTGTTGGATCAAAATTTGTACTATGTGGGACTGAAACTTACCTCAGCAACATTCACCTCTGTCACCATCAATATTCTTCCTGCTGTTACCTTCATTATGGCTCTCATTTTCAGGCTAGAAAGAGTGAACTTCAAGAAGGTTCGTAGCATTGCGAAGGTGGTCGGAACATTGGTGACGATCGGGGGAGCAATGGTGATGACTCTATACAAAGGACCCATCGTCGACATCTTCCACGGCCAAGGACGCCACGCCGCCCACCAAAGCAACGGCAGCGAATCCTCCGACCAGCACTGGGTCCTCGGCACTCTCATGCTCCTCGGCAGCATCGTCGAGCTGTCGTTGACCGCCTTGATATGCATCGCCGGCACGGTGGAGGGCTCCATTGTTACCCTTATTATGGAGCGCGACATGAGCGTCTGGGTCATCGGCTGGGACTCTCGGCTTCTCGCCGCCGTTTATACCGGTGTGATATGCTCTGGACTTGCATATTACATACAAGGCGTGGTAATTCGTGAACGTGGCCCTGTTTTTGTTACCTCTTTTACCCCTCTCTGTATGATTATTACCGCCATCCTTGGCTCCATTGTTTTGGCCGAGCAAATTCACCTCGGAAGCATAATCGGAGCCATTTTCATAGTGATGGGACTATACTTAGTGGTATGGGGCAAAGCCAAGGACCATATAAACAAACCGACGAACCAAAAAGGCGGCGCCGCCACCGAATTACCGATCACCGCCGAGCCGGAAACCACCGCCGCCGCCGTCGCCGCCGAGCGCTGCTCCTCCAAGGCTCCACCGGCGTGA 1083 51.8 MGADTGLAMFCGLIHKIKPYLAMISLQFGYAGMYIVTMLCFKKGMNHYVLAVYRHVVATIVIAPFAFVLERKIRPKMTFPILARILALGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFRLERVNFKKVRSIAKVVGTLVTIGGAMVMTLYKGPIVDIFHGQGRHAAHQSNGSESSDQHWVLGTLMLLGSIVELSLTALICIAGTVEGSIVTLIMERDMSVWVIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAILGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHINKPTNQKGGAATELPITAEPETTAAAVAAERCSSKAPPA 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3930842 3933629 - Cp4.1LG06g06400.1 Cpe06g00635 471415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00635 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Cpe06g00635 360 PANTHER WAT1-RELATED PROTEIN 13 338 IPR030184 GO:0016021|GO:0022857
Cpe06g00635 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 317 - -
Cpe06g00635 360 Pfam EamA-like transporter family 199 313 IPR000620 GO:0016020|GO:0016021
Cpe06g00635 360 Pfam EamA-like transporter family 21 147 IPR000620 GO:0016020|GO:0016021
Cpe06g00635 360 PANTHER WAT1-RELATED PROTEIN 13 338 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02043 Cpe06g00635 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02280 Cpe-Chr1:19291497 Cpe06g00635 Cpe-Chr6:3930842 3.08E-52 dispersed
Cpe06g00635 Cpe-Chr6:3930842 Cpe10g00870 Cpe-Chr10:4902433 6.62E-122 dispersed
Cpe10g01101 Cpe-Chr10:7109565 Cpe06g00635 Cpe-Chr6:3930842 7.27E-82 dispersed
Cpe11g00587 Cpe-Chr11:3499445 Cpe06g00635 Cpe-Chr6:3930842 2.97E-58 dispersed
Cpe01g02117 Cpe-Chr1:17901936 Cpe06g00635 Cpe-Chr6:3930842 2.28E-58 transposed
Cpe01g02043 Cpe-Chr1:17350414 Cpe06g00635 Cpe-Chr6:3930842 1.78E-72 wgd
Cpe02g00548 Cpe-Chr2:3275187 Cpe06g00635 Cpe-Chr6:3930842 0 wgd
Cpe02g00548 Cpe-Chr2:3275187 Cpe06g00635 Cpe-Chr6:3930842 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00635 - - csv:101216002 603.594