Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00678 ATGGCTGATGTGGCGAGTATAGCAGAGGCAGTGGCAGCAAGGTTTAGTTCTTTGGAGCTCATTGGAAGAGGATCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAGCTTAACAAAGAAGTTGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAGGATATTCAACAGGAAATTTCTGTTTTGTCACAATGTCGATCGCCCTACATTACTGAGTACTATGGTTCTTATCTCCACCAGACGAAATTATGGATAATAATGGAATATATGGCTGGTGGCTCCGTTGCAGATCTGCTGCAGTCTGGGCCACCTCTTGATGAAATGTCAATTGCATGCATTCTACGGGATTTGCTGCATGCAATTGATTATTTGCACAGTGAAGGAAAAATTCACAGGGATATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCCCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCGCCAGAGGTAATTCAGAATTCTGACGGATACAATGAGAAGGCTGACATCTGGTCCCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCTCCACTTTCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAGTCCACCTCAGTTGGATGAACATTTTTCTCGCCCTATGAAAGAATTAGTGTCACTTTGTCTGAAGAAAATACCTGCTGAGAGACCTAGTGCCAAAGAGCTTCTGAAGCATCGATTCATTAAGAATGCCAGGAAGAGCCCTAGGCTTCTGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGACGATGAAGAATCACCAACAAATGGTCCTAGAACTATAGGTGAATCATCAGACACTGTGAAAGTATCAAGAAATTTAAGAGAGGAAACTGTTCGTGCCAGCAACCAGAGTAAAGCTCCGAAGAATGCTGGATGGGACTTTAGTATTGGGGGTCCACATAGTACAGGTACTGTTCGAAGTTTAGTAAAACCACCTCAAATTAGGGAACGAAAACCAGAAATTCCTTATGGTCAGGCTGCACCTAGTAGAGCTGCAGAGAGTGGTCACTGGCAAGCTGCATCTGGAAGTGCACCACGCGACATAGCAAAAAATGCTAAAGATTCATTCAATATGGGAGATGATAGTGAAGATGCTTACAGAGTAAATTTGGCTGCAATAACAAGGCTTCATGGACTTTCACTTGTTCCAGAAGTTCTAATTATCCTTGCTATTGCAGCCAAGTTTAGAACCATTGTAGTCCGGTCTCCCAGAGGACCTCAAGCATCTACTCAATTTCATAATGAAAGCAATCCGTCTGGAAGCATACAAGCATATTTTGAGGACACATCTTATGGTGGTACTGTTGTTATGCGTGGTCAACGGGATGGTTCTGAGTCTCCTCGGACTCCAAAATCCAGATTTGGAATTCAAGAAAGGAATTCAAGTTTGCCTCCTGAAGATAGTGCATCAAACCTTGCGGAGGCAAAGGCTGCAATGCAAGCAGGATTGAAGAAATCTAATGTAAGGGATAGACCAGCTCTCACTAAACGCAACGACAGGCAGGAAATTAGGAAAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCAAGGCATTCTCGTGAATTCTTTGATGCACCAAAAGCATTGGCAAAACCATCTCTACCGATTGACAATGAAGAAAGTAGAAAAGTAGTGTCGTCTTCTGCACCATTATCAGTTTTGTTTATGTCATCCTTGAAAGAGGTAGTTGTAGATGATTCAGAAGGATCGCCTGCTCATACTGTAATTAATGCTCTTATAAGTATGGAACACCGAAAACCTGGATCCTGTGAGGTTCTTGTTACCAAGTTGCTCCAGAAATTGGCCAGTTCCGAGGAATCTTCACTGAAGGATTTACAAGACTTGGCAACTCGCATATTCACCAAGGCAAAGACAGTTCCTGATGTCACGGATTCTGATAGCAGCAAAAAGCAACCGAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCGAGGGATCTGAGTCCAGCTTAA 2142 42.39 MADVASIAEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQQEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLSDLHPMRVLFIIPRESPPQLDEHFSRPMKELVSLCLKKIPAERPSAKELLKHRFIKNARKSPRLLERIRERPKYQIKDDEESPTNGPRTIGESSDTVKVSRNLREETVRASNQSKAPKNAGWDFSIGGPHSTGTVRSLVKPPQIRERKPEIPYGQAAPSRAAESGHWQAASGSAPRDIAKNAKDSFNMGDDSEDAYRVNLAAITRLHGLSLVPEVLIILAIAAKFRTIVVRSPRGPQASTQFHNESNPSGSIQAYFEDTSYGGTVVMRGQRDGSESPRTPKSRFGIQERNSSLPPEDSASNLAEAKAAMQAGLKKSNVRDRPALTKRNDRQEIRKTEQTVSSSDSSRHSREFFDAPKALAKPSLPIDNEESRKVVSSSAPLSVLFMSSLKEVVVDDSEGSPAHTVINALISMEHRKPGSCEVLVTKLLQKLASSEESSLKDLQDLATRIFTKAKTVPDVTDSDSSKKQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSPA 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4198781 4209280 - Cp4.1LG06g06880.1 Cpe06g00678 471458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00678 713 Gene3D Transferase(Phosphotransferase) domain 1 12 301 - -
Cpe06g00678 713 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe06g00678 713 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 439 711 - -
Cpe06g00678 713 CDD STKc_MST3_like 14 287 - -
Cpe06g00678 713 MobiDBLite consensus disorder prediction 492 510 - -
Cpe06g00678 713 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 392 - -
Cpe06g00678 713 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe06g00678 713 MobiDBLite consensus disorder prediction 668 687 - -
Cpe06g00678 713 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Cpe06g00678 713 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 439 711 - -
Cpe06g00678 713 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 392 - -
Cpe06g00678 713 MobiDBLite consensus disorder prediction 531 549 - -
Cpe06g00678 713 MobiDBLite consensus disorder prediction 278 297 - -
Cpe06g00678 713 SUPERFAMILY Protein kinase-like (PK-like) 13 322 IPR011009 -
Cpe06g00678 713 MobiDBLite consensus disorder prediction 278 395 - -
Cpe06g00678 713 MobiDBLite consensus disorder prediction 477 568 - -
Cpe06g00678 713 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe06g00678 713 Coils Coil 41 68 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00695 Cpe06g00678 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00678 Cpe-Chr6:4198781 Cpe08g00913 Cpe-Chr8:7182865 5.92E-70 dispersed
Cpe19g00079 Cpe-Chr19:570282 Cpe06g00678 Cpe-Chr6:4198781 2.31E-35 dispersed
Cpe03g01392 Cpe-Chr3:11203371 Cpe06g00678 Cpe-Chr6:4198781 1.12E-35 transposed
Cpe09g00224 Cpe-Chr9:1284728 Cpe06g00678 Cpe-Chr6:4198781 1.16E-79 transposed
Cpe02g00695 Cpe-Chr2:4370141 Cpe06g00678 Cpe-Chr6:4198781 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62478 PF00069 Pkinase 2.20E-68 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00678 K08838 - csv:101214412 1149.42