Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe06g00680 | ATGACTGGGAAAGAGATTCTCCATAAGATGAAGGAGAACTCTCCTTGTGTTAAGATAGCAGTTTGGAGTGATGGGTTGATGGGTTTTCCTTCTTTCATTTTGACTCTTGAAGAAAAAGTTGGGCTCGGTTCGTCCGATCCGGACTCAGGAAAAGGAAAGAGCAAGATGTCGAAGCATGTCACACATGGTTATCATTTGGTGAAAGGGAAATCGAACCATGCCATGGAAGATTACGTGGTTGCCGAGTTTAAGCAAGTTGATCATCATGAGCTCGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAACTCTATCCCTGATTATTTACAGTCCCATCTATTTGCTAATATCATAAACGAGCCTGATTTCTGGACGAACCCAACGGACGCAGTCAGGAAAGCATACGAGGCAACCGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCGACTGCTGTTACAGCCATATTGATTGACTGTAAGAAACTAGTAGTCGGTAATGTGGGGGACTCCCGTGCAGTTATCTGTCGTAACGGTAAAGCCAGTCAATTATCAATCGATCACGAACCGAGCGTTGAAAGAAAAAGCATAGAGGACAGAGGTGGTTTCGTTTCAAACTTTCCTGGAGATGTTCCACGTGTCGACGGGCAGTTGGCGGTCGCAAGGGCATTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCCGAGCCTTACGTGGTTGTGGAGACAATCGACGACGAGACCGAATTGGTTATCTTAGCAAGCGACGGATTGTGGAAGGTTATGTCGAACGAGGAAGCTGTCGAGTCGATCAGGCATCTGAAAGACGCTCAAGCAGCTGCCAAACACCTGACAGAAGAGGCCCTCAAGAGGAAGAGCAGAGATGATATTTCTTGTATAGTTGTGAGATTTCTGTGA | 930 | 45.27 | MTGKEILHKMKENSPCVKIAVWSDGLMGFPSFILTLEEKVGLGSSDPDSGKGKSKMSKHVTHGYHLVKGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFANIINEPDFWTNPTDAVRKAYEATDAYILEKAVDFSHGGSTAVTAILIDCKKLVVGNVGDSRAVICRNGKASQLSIDHEPSVERKSIEDRGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVVETIDDETELVILASDGLWKVMSNEEAVESIRHLKDAQAAAKHLTEEALKRKSRDDISCIVVRFL | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4218014 | 4221422 | + | Cp4.1LG06g06790.1 | Cpe06g00680 | 471460 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe06g00680 | 309 | ProSiteProfiles | PPM-type phosphatase domain profile. | 61 | 308 | IPR001932 | - | |
Cpe06g00680 | 309 | SUPERFAMILY | PP2C-like | 57 | 308 | IPR036457 | - | |
Cpe06g00680 | 309 | Gene3D | - | 55 | 309 | IPR036457 | - | |
Cpe06g00680 | 309 | PANTHER | PROTEIN PHOSPHATASE 2C 39-RELATED | 35 | 308 | - | - | |
Cpe06g00680 | 309 | PANTHER | PROTEIN PHOSPHATASE 2C | 35 | 308 | IPR015655 | GO:0004722|GO:0006470 | |
Cpe06g00680 | 309 | Pfam | Protein phosphatase 2C | 73 | 301 | IPR001932 | - | |
Cpe06g00680 | 309 | SMART | PP2C_4 | 53 | 306 | IPR001932 | - | |
Cpe06g00680 | 309 | CDD | PP2Cc | 62 | 308 | IPR001932 | - | |
Cpe06g00680 | 309 | ProSitePatterns | Glycosyl hydrolases family 5 signature. | 113 | 122 | IPR018087 | GO:0004553|GO:0005975 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00809 | Cpe-Chr4:7626449 | Cpe06g00680 | Cpe-Chr6:4218014 | 3.15E-134 | dispersed | |
Cpe06g00680 | Cpe-Chr6:4218014 | Cpe09g00038 | Cpe-Chr9:231284 | 6.24E-54 | dispersed | |
Cpe06g00680 | Cpe-Chr6:4218014 | Cpe14g00210 | Cpe-Chr14:1175110 | 2.72E-114 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe06g00680 | K17506 | - | csv:101215129 | 492.656 |