Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00761 ATGACCCTTTTCGGGAAACCGACGGTGTTTGTACATGGGGTGGCGGCGAACAAGGCGGTGGTGTTTTTGGGCGAGGAGGAGGCGGTGTCGAACCGGCAGACGGAGTCGTTGAGGAGGATCTTGGGAGAGAGGAATTTGACGGAGTTGAGTGGTGAGGATCATAAGAGGGTTAGAGGGGCATTGGTTTGGTTCTTGAGGCCTCAGAGCTTGAAAGGGTTTGTGGGGAAGATGGATGGAGAGGTTAGGAAGCATTTGAACTTGCATTGGCATGGCAACAAGGAAGTCATTGTAGCGCCATTGATGAAAACACTAACCTTTGACATCATATGCTCTCTCCTGTTTGGGATTGAAGAAGGGCCAACAAGAAAGAGCATAATAGAATGCTTCAAAACAATGGTGGATGGGATTTGGTCTGTTCCAATCAACCTGCCATTCACAAGGTACAGCCATAGCCTCAAAGCAAGTGCAAAAGTTCAACAGATATTGAAGCAGCTTTTGAAGGACAAGGCACAAAAAATGGAAGAAGAAGAAGAAAAGGAAGAGGATAAGAACCTGATTACTTGTTTGCTTAGCATCAAGAACAAAGACAAAGAACAAGCTTTGAGTGAGGAGGAAATTGTGCACAATATCATCCTTCTATTGATTGCTGGACATGATACAACATCCATTTTGATTACTCTTATGCTTAGGGTTATGGCTACAAACCCAACTGTTTATGCAGCTGTTCTTCAAGAACATGAAGACATACTTAGAAGCAAAGAATGTGGGGAGGCCCTCACTTGGGAAGATGTTTCCAAGATGAAGTACACATGGAGAGTAGCATTGGAGACTTTGAGACTTTTCCCACCTGTCTTTGGAGGGTTTAGAATGGCTCTCAAAGACATTCAATTAGGTGGATACACTATTCCAAAAGGATGGCAAATATTTTGGGCGGCATCAATGACCCATTTGGACGAGAAAATATTCAGAGACCCACAAAAGTTTGAACCAAGTAGATTTGATCAGAACCAAACGTCCATTCCACCACCCTTATCTTTCATCGCCTTTGGTGGAGGACCCAGAATTTGCCCTGGCTATGAGTTTGCAAAGCTTGAAACTCTTGTCACAATTCATTACATAATCACTCAGTTCACTTGGAAGCTCTCTTCACAAGACTTCTTGACCAGAGATCCAAGCTTGATGCCCAACAAAGGGTTACCCATTCAACTTTACCCCAAATTATGA 1224 43.79 MTLFGKPTVFVHGVAANKAVVFLGEEEAVSNRQTESLRRILGERNLTELSGEDHKRVRGALVWFLRPQSLKGFVGKMDGEVRKHLNLHWHGNKEVIVAPLMKTLTFDIICSLLFGIEEGPTRKSIIECFKTMVDGIWSVPINLPFTRYSHSLKASAKVQQILKQLLKDKAQKMEEEEEKEEDKNLITCLLSIKNKDKEQALSEEEIVHNIILLLIAGHDTTSILITLMLRVMATNPTVYAAVLQEHEDILRSKECGEALTWEDVSKMKYTWRVALETLRLFPPVFGGFRMALKDIQLGGYTIPKGWQIFWAASMTHLDEKIFRDPQKFEPSRFDQNQTSIPPPLSFIAFGGGPRICPGYEFAKLETLVTIHYIITQFTWKLSSQDFLTRDPSLMPNKGLPIQLYPKL 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4810835 4814309 - Cp4.1LG06g08860.1 Cpe06g00761 471541

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00761 407 Gene3D Cytochrome P450 1 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 Pfam Cytochrome P450 4 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 PANTHER CYTOCHROME P450 26 2 404 - -
Cpe06g00761 407 PANTHER OS07G0520300 PROTEIN 2 404 - -
Cpe06g00761 407 Coils Coil 156 183 - -
Cpe06g00761 407 PRINTS E-class P450 group I signature 205 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 PRINTS E-class P450 group I signature 104 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 PRINTS E-class P450 group I signature 356 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 PRINTS E-class P450 group I signature 225 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 PRINTS E-class P450 group I signature 346 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 PRINTS E-class P450 group I signature 311 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 PRINTS P450 superfamily signature 272 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 PRINTS P450 superfamily signature 347 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 PRINTS P450 superfamily signature 216 233 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 SUPERFAMILY Cytochrome P450 2 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe06g00761 407 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 349 358 IPR017972 GO:0005506|GO:0016705
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00761 - - - csv:101212103 707.597
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00761 Cpe-Chr6:4810835 Cpe18g00228 Cpe-Chr18:3922862 1.72E-91 dispersed
Cpe15g00734 Cpe-Chr15:7694460 Cpe06g00761 Cpe-Chr6:4810835 2.11E-11 dispersed
Cpe06g00761 Cpe-Chr6:4810835 Cpe01g01044 Cpe-Chr1:6174460 2.53E-61 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g494 . . Bda07g00357 Bda09g00396 . . . . . . . Cma09g00945 . Car09g00859 Sed10g2110 Cpe06g00761 . Bhi09g01887 Tan01g3346 Cmetu01g0289 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo09g00944 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe06g00761 Cpe_Chr06 FPKM 2.692872 3.592469 0.462987 0.452981 2.007359 1.862835 1.887799 0.0 0.0 0.0