Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe06g00771 | ATGGCCCTTTCCCGTGAGATTGATGCTCGTTTGAAGACGAAATGTGATATGGTAGCTGATGCTTTTGTGATGGATGATATTGAAAATTTCTTGTTGGGGCCAAGGAGGAAGCTTCTATTTCATGTAACAAAGCGATTCGCAGTTGTTCAGTTTGGTTTAAGCTTCATCCAAACGAAGTTCATGGTTGAATTAGACTTCCAGATCCCATCTGCTTTCGATCCATTCGCCGACTCCAAGGATTCTGATGCCCCCGGAACCAAAGCTTATGTTCATATCCGCGTTCAGCAGAGGAATGGCAAAAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAGGACGTGAAGAAAGAATTCTGCTGTAATGGTAACGTTGTTCAAGACAAAGAATTGGGGAAGATAATCCAACTTCAAGGCGATCAACGCAAAAACGTGTCTCAGTTCCTTGTTCAGGCTGGTCTCGTTAAGAAGGATCAGATCAAAATTCATGGGTTTTGA | 519 | 42.97 | MALSREIDARLKTKCDMVADAFVMDDIENFLLGPRRKLLFHVTKRFAVVQFGLSFIQTKFMVELDFQIPSAFDPFADSKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF | 172 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4865024 | 4872507 | - | Cp4.1LG06g08880.1 | Cpe06g00771 | 471551 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe06g00771 | 172 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 90 | 160 | IPR001950 | GO:0003743|GO:0006413 | |
Cpe06g00771 | 172 | Gene3D | - | 54 | 172 | - | - | |
Cpe06g00771 | 172 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 61 | 172 | - | - | |
Cpe06g00771 | 172 | SUPERFAMILY | eIF1-like | 60 | 172 | IPR036877 | GO:0003743|GO:0006413 | |
Cpe06g00771 | 172 | Pfam | Translation initiation factor SUI1 | 87 | 160 | IPR001950 | GO:0003743|GO:0006413 | |
Cpe06g00771 | 172 | PANTHER | BNAA10G09260D PROTEIN | 61 | 172 | - | - | |
Cpe06g00771 | 172 | CDD | eIF1_SUI1 | 89 | 171 | IPR005874 | GO:0003743 | |
Cpe06g00771 | 172 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 67 | 172 | IPR005874 | GO:0003743 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g00773 | Cpe06g00771 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe06g00771 | Cpe-Chr6:4865024 | Cpe15g00752 | Cpe-Chr15:7797833 | 1.44E-59 | dispersed | |
Cpe02g00774 | Cpe-Chr2:4925947 | Cpe06g00771 | Cpe-Chr6:4865024 | 2.41E-10 | transposed | |
Cpe02g00773 | Cpe-Chr2:4921219 | Cpe06g00771 | Cpe-Chr6:4865024 | 3.05E-68 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe06g00771 | K03113 | - | csv:101202908 | 225.328 |