Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00771 ATGGCCCTTTCCCGTGAGATTGATGCTCGTTTGAAGACGAAATGTGATATGGTAGCTGATGCTTTTGTGATGGATGATATTGAAAATTTCTTGTTGGGGCCAAGGAGGAAGCTTCTATTTCATGTAACAAAGCGATTCGCAGTTGTTCAGTTTGGTTTAAGCTTCATCCAAACGAAGTTCATGGTTGAATTAGACTTCCAGATCCCATCTGCTTTCGATCCATTCGCCGACTCCAAGGATTCTGATGCCCCCGGAACCAAAGCTTATGTTCATATCCGCGTTCAGCAGAGGAATGGCAAAAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTTAAGGACGTGAAGAAAGAATTCTGCTGTAATGGTAACGTTGTTCAAGACAAAGAATTGGGGAAGATAATCCAACTTCAAGGCGATCAACGCAAAAACGTGTCTCAGTTCCTTGTTCAGGCTGGTCTCGTTAAGAAGGATCAGATCAAAATTCATGGGTTTTGA 519 42.97 MALSREIDARLKTKCDMVADAFVMDDIENFLLGPRRKLLFHVTKRFAVVQFGLSFIQTKFMVELDFQIPSAFDPFADSKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4865024 4872507 - Cp4.1LG06g08880.1 Cpe06g00771 471551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00771 172 ProSiteProfiles Translation initiation factor SUI1 family profile. 90 160 IPR001950 GO:0003743|GO:0006413
Cpe06g00771 172 Gene3D - 54 172 - -
Cpe06g00771 172 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 61 172 - -
Cpe06g00771 172 SUPERFAMILY eIF1-like 60 172 IPR036877 GO:0003743|GO:0006413
Cpe06g00771 172 Pfam Translation initiation factor SUI1 87 160 IPR001950 GO:0003743|GO:0006413
Cpe06g00771 172 PANTHER BNAA10G09260D PROTEIN 61 172 - -
Cpe06g00771 172 CDD eIF1_SUI1 89 171 IPR005874 GO:0003743
Cpe06g00771 172 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 67 172 IPR005874 GO:0003743
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00773 Cpe06g00771 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00771 Cpe-Chr6:4865024 Cpe15g00752 Cpe-Chr15:7797833 1.44E-59 dispersed
Cpe02g00774 Cpe-Chr2:4925947 Cpe06g00771 Cpe-Chr6:4865024 2.41E-10 transposed
Cpe02g00773 Cpe-Chr2:4921219 Cpe06g00771 Cpe-Chr6:4865024 3.05E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00771 K03113 - csv:101202908 225.328