Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe06g00787 | ATGGCGTATACTTTGGAATCATGGGCGAAGGAATACAATGAAGCCATGAAACTCTCTGAAGATATCAATGGCATGATTTCTGGGAGAAGTTCTGCTTCTGGACCAGAAGCTCAGCGTCATGCCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCGGAGAAAGAGATGAATCGACGCAGGGATATGATAGCGAATTTGAGATCGAAAGCTAACCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGAGATAGCTTACTTGGTCCAGAAATAAAGCCAGCAGAGAATAGGACGGAAGGCTTAGACAACCGAGGCCTACTCGAGCAAGATGAAGGCCTCGAGAAACTGGAAGGGACTATAATGAGCACAAAACATATTGCATTGGCTGTCAATGAAGAACTTAGCCTTCACACGAGACTTATCGATGATTTGGATGAACATGTCGATGTTACAGATTCCCGATTACGGAGAGTGCAGAAGAGGCTGGCAATAATGAACAAGCGGACCAAGGGTGGATGCACTTGCATGTCAATGATTTCATCAATTGTTGGAATTGTCGTTCTCATCACTCTCATATGGCTACTCATCAAGTATTTGTAA | 666 | 43.84 | MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLGPEIKPAENRTEGLDNRGLLEQDEGLEKLEGTIMSTKHIALAVNEELSLHTRLIDDLDEHVDVTDSRLRRVQKRLAIMNKRTKGGCTCMSMISSIVGIVVLITLIWLLIKYL | 221 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5008423 | 5011943 | + | Cp4.1LG06g08640.1 | Cpe06g00787 | 471567 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe06g00787 | 221 | Pfam | SNARE domain | 162 | 212 | IPR000727 | - | |
Cpe06g00787 | 221 | Gene3D | - | 127 | 189 | - | - | |
Cpe06g00787 | 221 | PANTHER | TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED | 6 | 212 | - | - | |
Cpe06g00787 | 221 | PANTHER | SYNTAXIN | 6 | 212 | IPR045242 | - | |
Cpe06g00787 | 221 | SUPERFAMILY | SNARE fusion complex | 129 | 186 | - | - | |
Cpe06g00787 | 221 | CDD | SNARE_Qc | 130 | 185 | - | - | |
Cpe06g00787 | 221 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 125 | 187 | IPR000727 | - | |
Cpe06g00787 | 221 | SMART | tSNARE_6 | 119 | 187 | IPR000727 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe06g00787 | Cpe14g00748 | CCT | |
Cpe02g00792 | Cpe06g00787 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe06g00787 | Cpe-Chr6:5008423 | Cpe14g00748 | Cpe-Chr14:5704118 | 9.68E-58 | dispersed | |
Cpe02g00792 | Cpe-Chr2:5071070 | Cpe06g00787 | Cpe-Chr6:5008423 | 1.95E-145 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe06g00787 | K08503 | - | csv:101208669 | 367.081 |