Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00790 ATGAGTTGCTGGAATAAATTTCCGGCGATGTGTTCTTCTTCTCGTACTTTCCTTCTTCTGTTTCCTCTGTTTCTTCACTCGTTCGTTGCGCTGGTATCTGCTCAGGGATCTAATAACACTTCTCCATGGCAGACTTTGAGTGGAGATCCTCCATTTGTTGTGGCTCGTGGTGGGTTTTCAGGGCTGTTTCCTGATTCGAGTGGATTTGCTTATAGTTTTGCAGTTATGGTTAGTGTTCCTGATGTGATCTTATGGTGCGATGTGCAATTAACTAAAGATGGAGTTGGAATTTGTCTCCCGGATCTGAGTTTTAACAATGCTACTGACGCTAAGGGGATTTTGGGGGAAAACCGCAGCAGTGTGTATCTTGTTAATGGAGTAGCTACTAAGGGATTGTTTACGGTCGATTTCAATGCGGAAGAACTGGCAAATGTTTCTCTTACTCAAGGTATCTTTTCTCGGACGAACAAGTTTGATGGCAATCGGTTTCCTATTCTCACTCCTGAAGATGTGGTTAACCAGTTCAAGCCACCAGGATTTTGGCTGAACGTTCAGCATGATGCATTCTTCACACAACGAAACTTGAGCATGAGGAACTTTGTACTTTCTGTATCCAGACGCATCATTGTTAACTACATATCATCACCAGAGGTGGGATTTCTTAGAAGCATAGCATCGAGATTTAATCCCCGCACAACGAAGTTGATCCTTCGGGTTTTACAACCAACTGATATTGAGATTACCACCAATCAGACATATCAATCTCTCTTACGCAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCTAAGACTTATATAGTGCCCATTAAGGATGGTTACATACAATCTGAAACCTCTCTCGTTTCTGACGCTCATAAAGCAAATCTGGAAATTTTTGCATCAGAGTTCTATAGTGACCTTCCACTAAGCTACAACTACAGTTATGATCCTGTTACTGAATACCTGTCTTACATCGACAACGGTAAATTTTCAGTTGATGGTGTGCTCACTGATTTCCCTATCAGTCCATCGTCAGCTATTGACTGTTTTGCTCATTTGGATAAGAATGCCAAAAGTCAAGCCAAACCTTTGGTTATTTCAAAATTTGGAGCTAGTGGAGACTTTCCTGGTTGCACAAATTTGGCGTATTCCAAGGCTATTTCTGATGGCGTTGATGTGCTTGACTGTCCAGTTCAAATGTCAAAAGACGGAATACCATTTTGCATGAGCTCAATTAATCTCATCGAGAGCACAACAATATCTCAAACATCATTCACTACTCTTTCTAAAAAAATTCCTGAAATTAGTCCTAACGATGGAATCTTTGCTTTTGACTTAACATGGGAAGAGATTCACGGCCTGACCCCGTCAATATTGAGCCCTTCATCGAAGTTCACGTTGTTCCGAAACCCAAAGTTCCGAAACGACGGGGAATTCTTAACGCTACCTGATTTCTTGGACTTGGCAAAGAATTCCAGCACTCTTTCTGGTGTCTTGATCCACATTGAGAATGCAGCCTACCTTGCTAAGGAGCAGGGTTTAGGTGTAATTGATGCGGTCATTGATTCCTTGAGCAAAGCTGGTTATGATAATCAGACAGCACAGAAAGTATTGATTCAATCTCCAAATAGCCCTGTTCTAATCAAATTTAAACAGGAAAAGAAAGAATACGAGCTTGTTTACAAAGTCGATGAGTCGATTAGTGATGTGCTCAATTCTACTGTTGTGGACATTAAGAGTTTTGCCAACTCTGTGACTGTCAGCAAGACCTCTGTCTTACCTGTAAATCTGCAATTTCTCATTGGACCTACAGATGTTGTGACGAAGCTGCAATCACTTAATCTCTCTGTATATGTGGAAACCTTCAGCAATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCAGATGCAACAGTAGAGATCAACTCATTTGTTATGGGATCCGGCATTGATGGAGTCATCACCGACTTTCCAAAGACATCTGCTAGATATAAAAAGAACCGGTGTTTAACAATGAAAGAAGCACCAAATTACATGAGCCCTGTCCAGCCTGGTAGCTTGATGCAGCTTATTACTGCAGACTACCTGCCTCCAAAGGAACGTCCAAGCCCGATTCTAGACGACAATGACGTAGCCGAGCCACCATTGCCTCCGGTTTCGAAGAAAGCCCCAGGACCTGCTGTGGATGATGGTTCTACAGCAACACCTCCAACATCTAAACCCAATGGACAACCCAAGCTTGGAGCTGGAACAGGCTTCTTGCTCTTGAACCTTGCCATACTCTGCCTTTCTCTTCTTCCATTCTGA 2319 42.26 MSCWNKFPAMCSSSRTFLLLFPLFLHSFVALVSAQGSNNTSPWQTLSGDPPFVVARGGFSGLFPDSSGFAYSFAVMVSVPDVILWCDVQLTKDGVGICLPDLSFNNATDAKGILGENRSSVYLVNGVATKGLFTVDFNAEELANVSLTQGIFSRTNKFDGNRFPILTPEDVVNQFKPPGFWLNVQHDAFFTQRNLSMRNFVLSVSRRIIVNYISSPEVGFLRSIASRFNPRTTKLILRVLQPTDIEITTNQTYQSLLRNLTFIKTFASGILVPKTYIVPIKDGYIQSETSLVSDAHKANLEIFASEFYSDLPLSYNYSYDPVTEYLSYIDNGKFSVDGVLTDFPISPSSAIDCFAHLDKNAKSQAKPLVISKFGASGDFPGCTNLAYSKAISDGVDVLDCPVQMSKDGIPFCMSSINLIESTTISQTSFTTLSKKIPEISPNDGIFAFDLTWEEIHGLTPSILSPSSKFTLFRNPKFRNDGEFLTLPDFLDLAKNSSTLSGVLIHIENAAYLAKEQGLGVIDAVIDSLSKAGYDNQTAQKVLIQSPNSPVLIKFKQEKKEYELVYKVDESISDVLNSTVVDIKSFANSVTVSKTSVLPVNLQFLIGPTDVVTKLQSLNLSVYVETFSNEFVSQAWDFFSDATVEINSFVMGSGIDGVITDFPKTSARYKKNRCLTMKEAPNYMSPVQPGSLMQLITADYLPPKERPSPILDDNDVAEPPLPPVSKKAPGPAVDDGSTATPPTSKPNGQPKLGAGTGFLLLNLAILCLSLLPF 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5040377 5048029 + Cp4.1LG06g08650.1 Cpe06g00790 471570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00790 772 Pfam Glycerophosphoryl diester phosphodiesterase family 86 344 IPR030395 GO:0006629|GO:0008081
Cpe06g00790 772 Pfam Glycerophosphoryl diester phosphodiesterase family 374 664 IPR030395 GO:0006629|GO:0008081
Cpe06g00790 772 SUPERFAMILY PLC-like phosphodiesterases 50 345 IPR017946 GO:0006629|GO:0008081
Cpe06g00790 772 CDD GDPD_SHV3_repeat_2 367 668 - -
Cpe06g00790 772 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 24 750 - -
Cpe06g00790 772 Gene3D Phosphatidylinositol (PI) phosphodiesterase 50 347 IPR017946 GO:0006629|GO:0008081
Cpe06g00790 772 Gene3D Phosphatidylinositol (PI) phosphodiesterase 365 668 IPR017946 GO:0006629|GO:0008081
Cpe06g00790 772 SUPERFAMILY PLC-like phosphodiesterases 366 668 IPR017946 GO:0006629|GO:0008081
Cpe06g00790 772 MobiDBLite consensus disorder prediction 706 749 - -
Cpe06g00790 772 CDD GDPD_SHV3_repeat_1 51 350 - -
Cpe06g00790 772 ProSiteProfiles GP-PDE domain profile. 51 351 IPR030395 GO:0006629|GO:0008081
Cpe06g00790 772 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 24 750 - -
Cpe06g00790 772 ProSiteProfiles GP-PDE domain profile. 367 669 IPR030395 GO:0006629|GO:0008081
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00801 Cpe06g00790 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00790 Cpe-Chr6:5040377 Cpe10g00591 Cpe-Chr10:3464534 1.22E-180 dispersed
Cpe09g01168 Cpe-Chr9:9896209 Cpe06g00790 Cpe-Chr6:5040377 2.52E-20 transposed
Cpe20g00074 Cpe-Chr20:397442 Cpe06g00790 Cpe-Chr6:5040377 1.14E-21 transposed
Cpe02g00801 Cpe-Chr2:5128672 Cpe06g00790 Cpe-Chr6:5040377 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00790 - - bhj:120086180 1269.22