Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00791 ATGTTACAGGGAAGTGTGACACATGAAGATTTTGAAGGTCACAAGGGAACAATAGGAGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGTATTGTACATTCAGAAATGCCTGCAGCCCAAGGTACCCAAAGGGGCCTCCAGCTATGGATCAACCTCTCTTCCAAGAACAAAATGATTGAACCAAACTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTACCAAAGATGGAGTGCAAGTGAAAGTAATAGCCGGTGAGGCATTGGGAGCAAAATCACCAATCTACACAAGAACACCAACCATGTACTTAGACTTCACTCTCAAGCCAAAAGCTCATCTCCAGCAGCCGATCCCGTCATCCTGGAACGCGTTCGTTTACGTTCTTGAGGGCGAAGGCATCTTCGGCAGTTCGAAGGCGACGTCGACGACAGCACATAACCTTCTTCTGCTCGGGTTCGGGGACGGTTTAGAGGTGTGGAATAAGTCAGGCAAGGCTCTGAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGGCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAGGAAATTGACCAAACAATTGATGATTTTGATAATTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCAATTTCTCTTGGGTTCTAA 681 46.26 MLQGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGTQRGLQLWINLSSKNKMIEPNYQEVSSKEIPEATKDGVQVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAHLQQPIPSSWNAFVYVLEGEGIFGSSKATSTTAHNLLLLGFGDGLEVWNKSGKALRFILVGGEPLSEAVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAAISLGF 226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 5063967 5069342 + Cp4.1LG06g08620.1 Cpe06g00791 471571
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00791 226 CDD cupin_pirin_C 101 177 - -
Cpe06g00791 226 Gene3D Jelly Rolls 1 204 IPR014710 -
Cpe06g00791 226 PIRSF Pirin 1 217 IPR012093 -
Cpe06g00791 226 Gene3D Jelly Rolls 73 178 IPR014710 -
Cpe06g00791 226 PANTHER PIRIN-RELATED 1 224 IPR012093 -
Cpe06g00791 226 Pfam Pirin C-terminal cupin domain 104 208 IPR008778 -
Cpe06g00791 226 SUPERFAMILY RmlC-like cupins 1 218 IPR011051 -
Cpe06g00791 226 PANTHER - 1 224 - -
Cpe06g00791 226 Pfam Pirin 1 51 IPR003829 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe06g00791 Cpe14g00761 CCT
Cpe02g00802 Cpe06g00791 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01269 Cpe-Chr3:10287007 Cpe06g00791 Cpe-Chr6:5063967 3.50E-104 dispersed
Cpe06g00791 Cpe-Chr6:5063967 Cpe14g00761 Cpe-Chr14:5978983 2.64E-117 dispersed
Cpe02g00802 Cpe-Chr2:5136619 Cpe06g00791 Cpe-Chr6:5063967 6.05E-147 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00791 K06911 - csv:101216351 437.958