Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe06g00791 | ATGTTACAGGGAAGTGTGACACATGAAGATTTTGAAGGTCACAAGGGAACAATAGGAGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGTATTGTACATTCAGAAATGCCTGCAGCCCAAGGTACCCAAAGGGGCCTCCAGCTATGGATCAACCTCTCTTCCAAGAACAAAATGATTGAACCAAACTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTACCAAAGATGGAGTGCAAGTGAAAGTAATAGCCGGTGAGGCATTGGGAGCAAAATCACCAATCTACACAAGAACACCAACCATGTACTTAGACTTCACTCTCAAGCCAAAAGCTCATCTCCAGCAGCCGATCCCGTCATCCTGGAACGCGTTCGTTTACGTTCTTGAGGGCGAAGGCATCTTCGGCAGTTCGAAGGCGACGTCGACGACAGCACATAACCTTCTTCTGCTCGGGTTCGGGGACGGTTTAGAGGTGTGGAATAAGTCAGGCAAGGCTCTGAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGGCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAGGAAATTGACCAAACAATTGATGATTTTGATAATTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGCAATTTCTCTTGGGTTCTAA | 681 | 46.26 | MLQGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGTQRGLQLWINLSSKNKMIEPNYQEVSSKEIPEATKDGVQVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAHLQQPIPSSWNAFVYVLEGEGIFGSSKATSTTAHNLLLLGFGDGLEVWNKSGKALRFILVGGEPLSEAVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAAISLGF | 226 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 5063967 | 5069342 | + | Cp4.1LG06g08620.1 | Cpe06g00791 | 471571 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe06g00791 | 226 | CDD | cupin_pirin_C | 101 | 177 | - | - | |
| Cpe06g00791 | 226 | Gene3D | Jelly Rolls | 1 | 204 | IPR014710 | - | |
| Cpe06g00791 | 226 | PIRSF | Pirin | 1 | 217 | IPR012093 | - | |
| Cpe06g00791 | 226 | Gene3D | Jelly Rolls | 73 | 178 | IPR014710 | - | |
| Cpe06g00791 | 226 | PANTHER | PIRIN-RELATED | 1 | 224 | IPR012093 | - | |
| Cpe06g00791 | 226 | Pfam | Pirin C-terminal cupin domain | 104 | 208 | IPR008778 | - | |
| Cpe06g00791 | 226 | SUPERFAMILY | RmlC-like cupins | 1 | 218 | IPR011051 | - | |
| Cpe06g00791 | 226 | PANTHER | - | 1 | 224 | - | - | |
| Cpe06g00791 | 226 | Pfam | Pirin | 1 | 51 | IPR003829 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe06g00791 | Cpe14g00761 | CCT | |
| Cpe02g00802 | Cpe06g00791 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe03g01269 | Cpe-Chr3:10287007 | Cpe06g00791 | Cpe-Chr6:5063967 | 3.50E-104 | dispersed | |
| Cpe06g00791 | Cpe-Chr6:5063967 | Cpe14g00761 | Cpe-Chr14:5978983 | 2.64E-117 | dispersed | |
| Cpe02g00802 | Cpe-Chr2:5136619 | Cpe06g00791 | Cpe-Chr6:5063967 | 6.05E-147 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe06g00791 | K06911 | - | csv:101216351 | 437.958 |