Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00809 ATGGCCCGCCGTCTCCTCCTCCTCTCCATTTTCCTCCTCCTCCTCTCCTCCGCCGTCGCCCACAGCGGCCACCACGACGATGACGATGCCGGAGAGGTCGAGGCCACTCCAAATCTCCGCTCCAAGCCGCTCATTCTTGTTAAGATCGGCTGTCTTATTCTCATCTTTTTCGGCACTTTCATCCCTGGAATCTCTCCCTGTTTCTTCAAATGGAACGATGGATTCCTTGTCCTTGGTACTCAGTTTGCTGGCGGCGTCTTCTTTGGCACTGCTATGATGCATTTCCTCTCCGATGCTAATGAGACGTTTGGCGATTTGACTGATAAGGCGTATCCGTTCGCGTTTATGCTTGCTTGTGTAGGGTTTTTGATGACTATGGCGGCGGATTGTGTGATATCGTATCTCTATCGGAAACAGGACGGTGATTCTTCGATTGATGTTGAGATTCGAGCTGCAATTTCACCCTCAAAGCTTCAGGTCCATAATGGCAGCAATGGCCATAACCCACATCCACACGCAGCTATCACAACAATGGGTTCATTTGGGGACAGCATTTTACTAATCGTTGCGTTGTGCTTTCACTCCGTGTTTGAAGGCATTGCCATCGGCGTTGCAGAGACCGAAGCCGATGCTTGGAGAGCCCTATGGACGATCTCCCTCCACAAGGTTTTTGCAGCCATTGCCATGGGCATTGCTCTCCTCCGAATGATCCCAAACCGCCCCTTGTTGTCGAGCGCTGCCTATTCCTTTGCTTTTGCCATCTCGAGCCCCATTGGCATCGCTATCGGACTCATAATCGACGCCACGACAGAAGGCGCGGTTGCAGATTGGATCTTTGCGATCTCGATGGGGCTGGCTTGTGGAGTGTTCATTTATGTGTCCATAAACCATCTGCTTTCAAAGGGACACACAACCAAGGATTCAGTTGTGGTGGACAATCCCAATCACAAGTTTGTTGCTGTGCTTTTAGGAATTGGGATTATTGCTGTTGTAATGATTTGGGACACCTGA 1011 50.35 MARRLLLLSIFLLLLSSAVAHSGHHDDDDAGEVEATPNLRSKPLILVKIGCLILIFFGTFIPGISPCFFKWNDGFLVLGTQFAGGVFFGTAMMHFLSDANETFGDLTDKAYPFAFMLACVGFLMTMAADCVISYLYRKQDGDSSIDVEIRAAISPSKLQVHNGSNGHNPHPHAAITTMGSFGDSILLIVALCFHSVFEGIAIGVAETEADAWRALWTISLHKVFAAIAMGIALLRMIPNRPLLSSAAYSFAFAISSPIGIAIGLIIDATTEGAVADWIFAISMGLACGVFIYVSINHLLSKGHTTKDSVVVDNPNHKFVAVLLGIGIIAVVMIWDT 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5174903 5178066 - Cp4.1LG06g08450.1 Cpe06g00809 471589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00809 336 Pfam ZIP Zinc transporter 46 331 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe06g00809 336 PANTHER ZINC/IRON TRANSPORTER 23 335 - -
Cpe06g00809 336 PANTHER ZINC TRANSPORTER 11 23 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00809 Cpe-Chr6:5174903 Cpe06g00552 Cpe-Chr6:3318109 8.22E-11 dispersed
Cpe06g00809 Cpe-Chr6:5174903 Cpe07g00560 Cpe-Chr7:3723601 1.33E-09 transposed
Cpe06g00809 Cpe-Chr6:5174903 Cpe09g00693 Cpe-Chr9:6137273 1.14E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00809 K14709 - csv:101208105 551.977