Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe06g00882 | ATGTCAACATTGAACCAAAGCAGCTCCCTCAACAATTGCACCAAGCTGCCCCTCCCACCCCATGACCAAATGACATCAACCCACAACAACGTAGTAGACGAAATCCAATCCCAACCCTTCGACTACTCGAAACGCGCTCAATGGTTACGCGCCGCCGTGCTAGGCGCCAACGACGGTCTCGTCTCAACCGCATCTCTCATGATGGGTATCGGCGCCGTCAAGCACGACGTTAAAGCCATGATCCTCACCGGTTTTGCCGGTCTCATTGCCGGTGCCTGCAGCATGGCGATCGGTGAATTCGTCTCCGTTTACTCTCAATTGGATATAGAAATGGCCCATATAAGAAGAAACAAGGACTTGGAGGAAGAGGAGAGAGAGAAACTGCCAAACCCTCTTCAGGCGGCAGCTGCCTCGGCGTTGGCCTTCTCCATCGGAGCTATGGTGCCACTGCTGGCGGCGGCGTTCATTAGGGATTATAGGGTTCGGCTAGGAGTTGTGGTGGCTGCAGTGACCATGGCTCTAGTAGGGTTTGGGTGGCTAGGGGCAGCGTTGGGGAAGGCACCAACGGTGAGGTCGGCGGTGAGGGTCTTGATCGGAGGGTGGACGGCGATGGCTGTGACTTTTGGGTTGACCAAGTTGATTGGATCAAGTGGACTATGA | 660 | 55.0 | MSTLNQSSSLNNCTKLPLPPHDQMTSTHNNVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIRRNKDLEEEEREKLPNPLQAAAASALAFSIGAMVPLLAAAFIRDYRVRLGVVVAAVTMALVGFGWLGAALGKAPTVRSAVRVLIGGWTAMAVTFGLTKLIGSSGL | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5832957 | 5833616 | - | Cp4.1LG06g07720.1 | Cpe06g00882 | 471662 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe06g00882 | 219 | PANTHER | FE(2+)/MN(2+) TRANSPORTER PCL1 | 23 | 216 | IPR008217 | GO:0005384|GO:0030026 | |
Cpe06g00882 | 219 | CDD | Nodulin-21 | 47 | 188 | - | - | |
Cpe06g00882 | 219 | Pfam | VIT family | 124 | 211 | IPR008217 | GO:0005384|GO:0030026 | |
Cpe06g00882 | 219 | Pfam | VIT family | 49 | 125 | IPR008217 | GO:0005384|GO:0030026 | |
Cpe06g00882 | 219 | Coils | Coil | 104 | 124 | - | - | |
Cpe06g00882 | 219 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cpe06g00882 | 219 | PANTHER | VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED | 23 | 216 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe06g00882 | Cpe-Chr6:5832957 | Cpe13g00679 | Cpe-Chr13:6371430 | 1.09E-87 | dispersed | |
Cpe06g00882 | Cpe-Chr6:5832957 | Cpe01g02114 | Cpe-Chr1:17887464 | 4.05E-103 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe06g00882 | K22736 | - | csv:101210510 | 361.303 |