Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00882 ATGTCAACATTGAACCAAAGCAGCTCCCTCAACAATTGCACCAAGCTGCCCCTCCCACCCCATGACCAAATGACATCAACCCACAACAACGTAGTAGACGAAATCCAATCCCAACCCTTCGACTACTCGAAACGCGCTCAATGGTTACGCGCCGCCGTGCTAGGCGCCAACGACGGTCTCGTCTCAACCGCATCTCTCATGATGGGTATCGGCGCCGTCAAGCACGACGTTAAAGCCATGATCCTCACCGGTTTTGCCGGTCTCATTGCCGGTGCCTGCAGCATGGCGATCGGTGAATTCGTCTCCGTTTACTCTCAATTGGATATAGAAATGGCCCATATAAGAAGAAACAAGGACTTGGAGGAAGAGGAGAGAGAGAAACTGCCAAACCCTCTTCAGGCGGCAGCTGCCTCGGCGTTGGCCTTCTCCATCGGAGCTATGGTGCCACTGCTGGCGGCGGCGTTCATTAGGGATTATAGGGTTCGGCTAGGAGTTGTGGTGGCTGCAGTGACCATGGCTCTAGTAGGGTTTGGGTGGCTAGGGGCAGCGTTGGGGAAGGCACCAACGGTGAGGTCGGCGGTGAGGGTCTTGATCGGAGGGTGGACGGCGATGGCTGTGACTTTTGGGTTGACCAAGTTGATTGGATCAAGTGGACTATGA 660 55.0 MSTLNQSSSLNNCTKLPLPPHDQMTSTHNNVVDEIQSQPFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKHDVKAMILTGFAGLIAGACSMAIGEFVSVYSQLDIEMAHIRRNKDLEEEEREKLPNPLQAAAASALAFSIGAMVPLLAAAFIRDYRVRLGVVVAAVTMALVGFGWLGAALGKAPTVRSAVRVLIGGWTAMAVTFGLTKLIGSSGL 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5832957 5833616 - Cp4.1LG06g07720.1 Cpe06g00882 471662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00882 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 23 216 IPR008217 GO:0005384|GO:0030026
Cpe06g00882 219 CDD Nodulin-21 47 188 - -
Cpe06g00882 219 Pfam VIT family 124 211 IPR008217 GO:0005384|GO:0030026
Cpe06g00882 219 Pfam VIT family 49 125 IPR008217 GO:0005384|GO:0030026
Cpe06g00882 219 Coils Coil 104 124 - -
Cpe06g00882 219 MobiDBLite consensus disorder prediction 1 26 - -
Cpe06g00882 219 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 23 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00882 Cpe-Chr6:5832957 Cpe13g00679 Cpe-Chr13:6371430 1.09E-87 dispersed
Cpe06g00882 Cpe-Chr6:5832957 Cpe01g02114 Cpe-Chr1:17887464 4.05E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00882 K22736 - csv:101210510 361.303