Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00906 ATGGCTTTCAGTTCCGCAGTAGCATCGCAGCTCCACATTTTCCGAACCTCCAATCTCCGGTTTCCGGATTCCAACAAATCCTGGAATCGGAGACGGCGACGTATAGCGCCCGCTGTAATCCGGTGCGAGAAGGTCGTTGGAATCGACCTAGGAACGACGAACTCGGCGGTCGCGGCGATGGAGGGAGGGCAACCGACGATCGTGACGAACGCGGAGGGACAGAGGACGACGCCGTCGGTTGTGGCGTACACGAAGACTGGCGATCGGCTTGTCGGTCAGTTGGCGAAGCGACAGGCGGTGGTTAATCCGGAGAATACTTTCTTCTCTGTGAAGAGATTCATTGGAAGGAAGATGGCGGAGGTGGATGAGGAGGCTAAGCAAGTCTCTTACAAGGTTATCGCCGATGAGAATGGGAATGTGAAGCTCGATTGCCCTGCCGTCGGCAAGCAATTTGCCGCTGAGGAGATTTCCGCTCAGGTTTTAAGAAAGCTGGTGGATGATGCATCAAAGTTCTTGAATGATCAAGTAGGAAAAGCTGTAGTCACAGTCCCAGCATATTTCAATGACTCGCAAAGGACAGCGACGAAAGACGCTGGTCGCATTGCCGGTCTCGAAGTTCTTCGCATCATCAACGAACCAACTGCTGCTTCCCTTGCTTATGGCTTTGACAAGAAAACCAATGAGACCATTCTTGTTTTCGACCTCGGTGGTGGAACGTTTGACGTCTCAGTTCTTGAGGTTGGAGATGGCGTGTTCGAGGTTCTTTCTACTTCAGGTGATACCCATTTGGGTGGTGATGATTTTGACAAGAGGATTGTCGATTGGCTTGCCGAGAGCTTTAAGAGCGACGAAGGAATCGATCTCTTGAAAGACAAACAAGCGCTGCAACGTCTAACAGAAACGGCCGAGAAGGCGAAGATTGAGCTATCATCTTTAACACAGACCAATATTAGTTTGCCATTTATCACTGCGACCCGGGACGGTCCGAAACATATCGATACTACACTTACTAGGGTGAAGTTTGAAGAGTTGTGTTCAGACTTGCTAGATAGGCTGCGATCGCCAGTTGAAACGGCTCTGAAGGATGCGAAGTTGTCGTTCAAAGATATAGATGAAGTCATCCTCGTCGGGGGCTCGACTCGTATCCCAGCAGTTCAAGAGCTTGTTAAGAAAATGACAGGGAAAGAACCAAACATGACAGTAAATCCCGATGAAGTGGTTGCGCTCGGGGCTGCAGTTCAGGCTGGTGTTTTAGCTGGAGATGTCAGTAACATTGTTCTCTTAGACGTCACGCCGCTCTCTCTCGGTTTGGAAACTTTGGGCGGAGTAATGACCAAAATCATTCCAAGGAACACGACGTTACCGACATCCAAATCCGAGGTGTTTTCAACAGCAGCAGATGGACAAACAAGTGTTGAGATTAATGTATGTCAAGGCGAACGAGAGTTTGTTCGGGACAATAAGTCTCTCGGACGAATACTCCTCGACGGTATCCCACCCGCACCCCGTGGCGTTCCTCAGATCGAAGTGAAATTCGACATCGACGCTAACGGTATTCTCTCCGTCACCGCCATTGACAAGGGAACTGGGAAGAAGCAGGACATCACAATCACTGGCGCTAGTACTCTACCAAGTGACGAGGTGGATAGAATGGTTAAAGAAGCAGAGAAGTTCGCAAAGGAAGATAAAGAGAAAAGGGATGCCATAGACACAAAGAACCAAGCAGATTCTGCTGTGTACCAAACTGAAAAACAGCTAAAGGAACTCGGAGACAAGATTCCCCAATCCGTTCGAGAGACCGTTGAGGCTAAGCTCAACGTTCTTAAGGACGCCATCGCCAATGGGTCAACCGAAACAATCAAGAACTCCATGGCTGCATTGAATCAAGAAGTAATGCAGATGGGGCAGTCCCTCTACAGCCAAGGAGCAGCCTCCAGCGACAGGACTGCGTCGGGAACTCAGTCTGCTTCATCGAGATCAGCTGGAGAAGCTGATGGCGATGTCATCGACGCAGATTTCGTGGATAGCGAGTGA 2034 49.85 MAFSSAVASQLHIFRTSNLRFPDSNKSWNRRRRRIAPAVIRCEKVVGIDLGTTNSAVAAMEGGQPTIVTNAEGQRTTPSVVAYTKTGDRLVGQLAKRQAVVNPENTFFSVKRFIGRKMAEVDEEAKQVSYKVIADENGNVKLDCPAVGKQFAAEEISAQVLRKLVDDASKFLNDQVGKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFDKKTNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKSDEGIDLLKDKQALQRLTETAEKAKIELSSLTQTNISLPFITATRDGPKHIDTTLTRVKFEELCSDLLDRLRSPVETALKDAKLSFKDIDEVILVGGSTRIPAVQELVKKMTGKEPNMTVNPDEVVALGAAVQAGVLAGDVSNIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVCQGEREFVRDNKSLGRILLDGIPPAPRGVPQIEVKFDIDANGILSVTAIDKGTGKKQDITITGASTLPSDEVDRMVKEAEKFAKEDKEKRDAIDTKNQADSAVYQTEKQLKELGDKIPQSVRETVEAKLNVLKDAIANGSTETIKNSMAALNQEVMQMGQSLYSQGAASSDRTASGTQSASSRSAGEADGDVIDADFVDSE 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6243990 6250033 + Cp4.1LG06g07510.1 Cpe06g00906 471686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00906 677 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 420 576 IPR029047 -
Cpe06g00906 677 Gene3D Actin; Chain A, domain 4 265 352 - -
Cpe06g00906 677 SUPERFAMILY Actin-like ATPase domain 44 224 IPR043129 -
Cpe06g00906 677 MobiDBLite consensus disorder prediction 637 661 - -
Cpe06g00906 677 Gene3D - 221 402 - -
Cpe06g00906 677 ProSitePatterns Heat shock hsp70 proteins family signature 3. 373 387 IPR018181 -
Cpe06g00906 677 PRINTS 70kDa heat shock protein signature 44 57 - -
Cpe06g00906 677 PRINTS 70kDa heat shock protein signature 72 84 - -
Cpe06g00906 677 PRINTS 70kDa heat shock protein signature 95 103 - -
Cpe06g00906 677 PRINTS 70kDa heat shock protein signature 179 199 - -
Cpe06g00906 677 PRINTS 70kDa heat shock protein signature 238 248 - -
Cpe06g00906 677 PRINTS 70kDa heat shock protein signature 370 386 - -
Cpe06g00906 677 PRINTS 70kDa heat shock protein signature 401 421 - -
Cpe06g00906 677 PRINTS 70kDa heat shock protein signature 424 443 - -
Cpe06g00906 677 PRINTS 70kDa heat shock protein signature 505 521 - -
Cpe06g00906 677 SUPERFAMILY Actin-like ATPase domain 227 418 IPR043129 -
Cpe06g00906 677 TIGRFAM prok_dnaK: chaperone protein DnaK 44 639 IPR012725 GO:0005524|GO:0006457|GO:0051082
Cpe06g00906 677 CDD HSPA9-Ssq1-like_NBD 42 418 - -
Cpe06g00906 677 ProSitePatterns Heat shock hsp70 proteins family signature 1. 48 55 IPR018181 -
Cpe06g00906 677 Coils Coil 288 315 - -
Cpe06g00906 677 PANTHER STROMAL 70 KDA HEAT SHOCK-RELATED PROTEIN, CHLOROPLASTIC-LIKE 27 653 - -
Cpe06g00906 677 Hamap Chaperone protein DnaK [dnaK]. 42 676 IPR012725 GO:0005524|GO:0006457|GO:0051082
Cpe06g00906 677 MobiDBLite consensus disorder prediction 637 677 - -
Cpe06g00906 677 ProSitePatterns Heat shock hsp70 proteins family signature 2. 232 245 IPR018181 -
Cpe06g00906 677 Gene3D - 46 415 - -
Cpe06g00906 677 Pfam Hsp70 protein 45 639 IPR013126 GO:0005524|GO:0140662
Cpe06g00906 677 Gene3D - 543 643 IPR029048 -
Cpe06g00906 677 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 417 541 IPR029047 -
Cpe06g00906 677 PANTHER HEAT SHOCK PROTEIN 70KDA 27 653 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00906 Cpe-Chr6:6243990 Cpe17g00588 Cpe-Chr17:4863376 0 dispersed
Cpe06g00906 Cpe-Chr6:6243990 Cpe14g00238 Cpe-Chr14:1382940 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00906 K03283 - csv:101212307 1193.33