Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00927 ATGAAATGGAGAGATGATAAAGCAAGCGCACTCATTGATTCAAATTCCCAACGAGTTCCAGTTCATCACAACCATTACCAGATTCCAATTCCGTTCATCGATCCATCATTTTCTCCCTTCCAAATCAGACCGCTGGGGAATCTCACTTCCACACGTTCCCGGAATCATCGTCGCCGGTCGCCCATGGCCGCCGCGGGTAACTCTTCATCCTCCTCTTCGTCCTCCTCCAACCCTTTCATTTTCTCCCCCGATTCTCCCCCTAGACTCGCTCTCACACCGCATCAGATTAAGCTTTGTTCCGAAGCTCTTGAGGCCTTCAAGGAGAAGCTCCAGATGCCTGATGTCATCAACCAGGAGTTCGCCCGATTGCAGGCCCAGAGAATAACCGCATCGGATATGAAGAAAAATTGCTCTGTGGCTCTTGACAATGTCAACATCAGTAAGAATCGTTACACCGATGTATTACCCTTTGACGAGACTAGAGTCGTGCTCGACTCTTGTAAGGATTACAGACCTTCTGCAAAGGGTTATATCAATGCAAGCTTTATTTCCAGTTCCTCCTCAGAAAGCCTTTCTAAGTTTATTGCCACACAAGGTCCGTTACCACACACTTATGAGGATTTCTGGGAGATGGTATTGCAGTATAAATGCCCTGCAATCTTGATGCTTACTCGTCTCATTGATAATTACAAGACGGTGAAGTGTGGAGATTACTTTCCAGCTGAAGATGGTAGTAGAGATTTTGGTAATCTATTGGTAGTCTCCAAATGGATAAAATCTTCCATTTCCTCTCTTATACTGCGCCATTTGGAAGTGAACCATAAAGAGTCAGAAGAACATGTAGCTGTTCTACATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTAATGACACACTTGCTGTTCGTGAAATGTTGAAGAGGCTGTATCATTTACCACCCGATCTCGGCCCAATAGTGGTGCATTGCAGTGCAGGTATTGGAAGAACTGGAACATATTGTGCAATTCATAACACAATTCAGAGAATCCTTATTGGAGACTTGTCTGCTTTAGATCTTGTCAGTACCATTTTTACATTTAGATCCCAGCGAATTGGAATGGTCCAAACACTGGTCGTTATATGCACGATAACGATCAATACTTTTTCTGCTATAGAACCATTGTTGATGAACTACAAGACCTTATATCTGTTCCACAGTAGAGGCTCGAAGCGACGGATTAATGACCGACCGTATGCGGGGTTGGGATCTTGCTTAATAAAGAGCTTGCTGGATTTGATCTTCTCAGCGTTGATGAAATCAGCAGCTGTGGTTCCAGGAGGTTCGTTTTCTCGAGCAGCCGAGTATGAACACTGTTCATTGTGGTCACAGTGA 1377 44.59 MKWRDDKASALIDSNSQRVPVHHNHYQIPIPFIDPSFSPFQIRPLGNLTSTRSRNHRRRSPMAAAGNSSSSSSSSSNPFIFSPDSPPRLALTPHQIKLCSEALEAFKEKLQMPDVINQEFARLQAQRITASDMKKNCSVALDNVNISKNRYTDVLPFDETRVVLDSCKDYRPSAKGYINASFISSSSSESLSKFIATQGPLPHTYEDFWEMVLQYKCPAILMLTRLIDNYKTVKCGDYFPAEDGSRDFGNLLVVSKWIKSSISSLILRHLEVNHKESEEHVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILIGDLSALDLVSTIFTFRSQRIGMVQTLVVICTITINTFSAIEPLLMNYKTLYLFHSRGSKRRINDRPYAGLGSCLIKSLLDLIFSALMKSAAVVPGGSFSRAAEYEHCSLWSQ 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6835787 6845879 + Cp4.1LG06g09200.1 Cpe06g00927 471707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00927 458 SMART PTPc_3 115 384 IPR000242 GO:0004725|GO:0006470
Cpe06g00927 458 PRINTS Protein tyrosine phosphatase signature 176 183 IPR000242 GO:0004725|GO:0006470
Cpe06g00927 458 PRINTS Protein tyrosine phosphatase signature 281 298 IPR000242 GO:0004725|GO:0006470
Cpe06g00927 458 PRINTS Protein tyrosine phosphatase signature 352 367 IPR000242 GO:0004725|GO:0006470
Cpe06g00927 458 PRINTS Protein tyrosine phosphatase signature 194 214 IPR000242 GO:0004725|GO:0006470
Cpe06g00927 458 PRINTS Protein tyrosine phosphatase signature 319 337 IPR000242 GO:0004725|GO:0006470
Cpe06g00927 458 ProSitePatterns Tyrosine specific protein phosphatases active site. 322 332 IPR016130 GO:0016311|GO:0016791
Cpe06g00927 458 MobiDBLite consensus disorder prediction 44 84 - -
Cpe06g00927 458 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 68 374 - -
Cpe06g00927 458 SMART ptp_7 282 381 IPR003595 -
Cpe06g00927 458 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 301 371 IPR000387 GO:0016311|GO:0016791
Cpe06g00927 458 MobiDBLite consensus disorder prediction 62 82 - -
Cpe06g00927 458 Gene3D Protein tyrosine phosphatase superfamily 90 397 IPR029021 -
Cpe06g00927 458 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 96 374 IPR029021 -
Cpe06g00927 458 Pfam Protein-tyrosine phosphatase 145 372 IPR000242 GO:0004725|GO:0006470
Cpe06g00927 458 ProSiteProfiles PTP type protein phosphatase domain profile. 116 371 IPR000242 GO:0004725|GO:0006470
Cpe06g00927 458 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 68 374 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00927 Cpe-Chr6:6835787 Cpe08g00907 Cpe-Chr8:7137345 4.30E-09 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00927 - - bhj:120086129 570.081