Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe06g00964 | ATGGCCGCTCTTCACCAAACCGCCGCCTCACTCCAGGCCAAACTCCTTCCAACAATCCGAATCTCCCGGACCACTCCGGCAAACCTCTCTTTCTCCGCCACTTTTCCTTCTGGAAGACTCCGCCTCGGCCAATACCGCTCTCACGGCGGCGCTAGAATGTCCGCCTCGGCTGCTGGAAGCTACGCTGCGGCGTTGGCCGAAGTCGCTGCGTCTAACAACACGCTGGATGCAACAAGCGGCGATGTCGAGAAGATCGAGAGCGTGTTCGCGGATTCGCAGGTGTTCGATTTCTTCGCGAATCCGACGATTAGCATCGAGAAGAAACTTGCGTTGGTGGATGAGATCGCGGCGTCGTCGTCTCTACTGCCGCATACGGCGAATTTCTTGAAGATCCTAGTGGACGCGAAGAGAATCGATATCGTGAAGGAAATCGTGACGGAGTTCGAATCGGTTTACAACAAAATTACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGGCGTTGGAGCAGCAGCATTTGGCGCAGATCGCGAAGCAGGTGCAGAAATTGAGTGGAGCTAAGAATGTGAGGATCAAGACGCAGATTGATCCGAGTCTGGTGGCTGGATTCACAGTCAGGTTTGGAAATTCTGGATCGAAACTCATTGATTTGAGCGTCAAGAAACAGCTTGAGGAAATTGCTTCTCAGCTTGATCTTGGTAATATTCAACTGGCTGTATAA | 723 | 52.56 | MAALHQTAASLQAKLLPTIRISRTTPANLSFSATFPSGRLRLGQYRSHGGARMSASAAGSYAAALAEVAASNNTLDATSGDVEKIESVFADSQVFDFFANPTISIEKKLALVDEIAASSSLLPHTANFLKILVDAKRIDIVKEIVTEFESVYNKITNTELAVVSSVVALEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIASQLDLGNIQLAV | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 9084013 | 9084735 | - | Cp4.1LG06g09510.1 | Cpe06g00964 | 471744 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe06g00964 | 240 | Hamap | ATP synthase subunit delta [atpD]. | 53 | 233 | IPR000711 | GO:0015986|GO:0046933 | |
Cpe06g00964 | 240 | PRINTS | ATP synthase delta subunit signature | 57 | 76 | IPR000711 | GO:0015986|GO:0046933 | |
Cpe06g00964 | 240 | PRINTS | ATP synthase delta subunit signature | 126 | 137 | IPR000711 | GO:0015986|GO:0046933 | |
Cpe06g00964 | 240 | PRINTS | ATP synthase delta subunit signature | 137 | 151 | IPR000711 | GO:0015986|GO:0046933 | |
Cpe06g00964 | 240 | PRINTS | ATP synthase delta subunit signature | 188 | 203 | IPR000711 | GO:0015986|GO:0046933 | |
Cpe06g00964 | 240 | PRINTS | ATP synthase delta subunit signature | 206 | 224 | IPR000711 | GO:0015986|GO:0046933 | |
Cpe06g00964 | 240 | SUPERFAMILY | N-terminal domain of the delta subunit of the F1F0-ATP synthase | 55 | 157 | IPR026015 | - | |
Cpe06g00964 | 240 | Gene3D | - | 57 | 149 | IPR026015 | - | |
Cpe06g00964 | 240 | PANTHER | ATP SYNTHASE DELTA CHAIN | 48 | 239 | IPR000711 | GO:0015986|GO:0046933 | |
Cpe06g00964 | 240 | Pfam | ATP synthase delta (OSCP) subunit | 58 | 231 | IPR000711 | GO:0015986|GO:0046933 | |
Cpe06g00964 | 240 | PANTHER | BNACNNG66500D PROTEIN | 48 | 239 | - | - | |
Cpe06g00964 | 240 | TIGRFAM | ATP_synt_delta: ATP synthase F1, delta subunit | 58 | 231 | IPR000711 | GO:0015986|GO:0046933 | |
Cpe06g00964 | 240 | ProSitePatterns | ATP synthase delta (OSCP) subunit signature. | 190 | 209 | IPR020781 | GO:0015986|GO:0016020|GO:0046933 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01582 | Cpe-Chr2:13335417 | Cpe06g00964 | Cpe-Chr6:9084013 | 1.16E-08 | dispersed | |
Cpe03g00867 | Cpe-Chr3:5479933 | Cpe06g00964 | Cpe-Chr6:9084013 | 1.59E-09 | dispersed | |
Cpe06g00964 | Cpe-Chr6:9084013 | Cpe12g00823 | Cpe-Chr12:7341391 | 1.91E-11 | dispersed | |
Cpe08g00605 | Cpe-Chr8:3983608 | Cpe06g00964 | Cpe-Chr6:9084013 | 1.05E-17 | transposed | |
Cpe02g00940 | Cpe-Chr2:7719502 | Cpe06g00964 | Cpe-Chr6:9084013 | 1.41E-138 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe06g00964 | K02113 | - | csv:101211740 | 379.793 |