Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe06g00974 ATGGTTCACGAAGCGGCTGAGAATGGCGGAAGCGATATGGTAATTGACGGGAATGAACAGAAGCCGAAGAACATTGTTTCAAATGTTTTCGATGCGAATTATCTCAAAATTTACTACGGCAAGCTTTTTCCTTTTGCTGATTTTTTCAAATGGATGTCTTATGGAAATGGTAAGCCCTTGATTCTTGGAATCAGAAACAAAATGTTATCCCGTCAAAAGAACCTAATTAATATTGAATATGCAAATTTCCTGCTTAATGTGGTTGTAGATGGCAAGCATCCGGGCAGTGATCATTCCTATATTGGCCGGAGAGAATTTTCATTCACTTTGGATAATGATATTTATCTACGGTTTCAATCCTTCAACAGTTTATCTGAAATGGAAAGTTCGACCAAGGAAAAATGTCCATTTAAAATTGATATTGGGCCTGTATACAGCGTGGATCCTGCAAAGAGACACGCATATGCTGGTGCTAATGTATTTACTCCAGTGGAGAGAGAGCTAGTTTTTGATATTGATATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTGGATTGCTGGCCTTTAATGACTGCTGCGATCAAAGTGATTGATACTACTCTCCGAGATGACTTCGGATTTAACCACATTCTGTGGGTATTTAGTGGGCGACGTGGTGTTCATTGTTGGGTCTGTGATGGCAAAGCAAGAAGGTTGTCTAATGAACAGCGAGCTGCCATTGCTGACTATTTCCATTTATATCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCGGTTCTTCATCCATTTCTCGCGAGATCATACATCGAAGTTCTCAAGGATAGCTTTGAATCAAAATTGCTTTGTAGTCAAAAGATTTTCTCAACTGAGGAGAGATATGAGAAAATATTAGATATGATTCATGATGAATCCATTACCTCAGAGCTTCGTGGAAGGTGGCAAGATAATAGGCGACCTTCTAAAAATGATGTTAATTTAGTAAGATGGGAGCAACTAAAAAATATGTTGCAATCAGGGAAACATAAGTCACAAGGAATGCGTAGGCATGTTGAAGAGATCGTTTTCTCTTTTACCTACCCTAGGCTTGATTTGGAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTATCTGTGTCCCGATCGACCCTGAACGCTGTGATGAGTTTGATCCTACTACCGTGCCAACTGTTGCCCAGCTCCTAGAAGAACTTAATGCAGCAGACATGGAAGTAGATAGTGAGACTGACTGGGATAGAACCTCACTTGGGGAATCGATTAGGTTTTTCAGATCGGCATTCTTACAGCCATTACTGAAATCATGCAAGGAGGAGATAGAATCTTCATACAATGCTAAAGTTCAACAGTCGAAGAATCCTCTGAGTTGGTAG 1452 40.01 MVHEAAENGGSDMVIDGNEQKPKNIVSNVFDANYLKIYYGKLFPFADFFKWMSYGNGKPLILGIRNKMLSRQKNLINIEYANFLLNVVVDGKHPGSDHSYIGRREFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYAGANVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEVLKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKNDVNLVRWEQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLKSCKEEIESSYNAKVQQSKNPLSW 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9216346 9225311 + Cp4.1LG06g09460.1 Cpe06g00974 471754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe06g00974 483 Pfam DNA primase small subunit 170 403 IPR002755 GO:0003896|GO:0006269
Cpe06g00974 483 Gene3D DNA primase, PRIM domain 22 464 - -
Cpe06g00974 483 PANTHER DNA PRIMASE SMALL SUBUNIT 73 483 IPR014052 GO:0003896|GO:0006269
Cpe06g00974 483 SUPERFAMILY Prim-pol domain 29 429 - -
Cpe06g00974 483 CDD AE_Prim_S 92 412 IPR014052 GO:0003896|GO:0006269
Cpe06g00974 483 PANTHER DNA PRIMASE 73 483 - -
Cpe06g00974 483 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 100 421 IPR014052 GO:0003896|GO:0006269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe06g00974 K02684 - csv:101203146 854.358