Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00019 ATGAACACTGCATCGCCACTTCTTCCCACATATGGCTTCTTCATCATTTTCATCACCGCTCTTTTCTTGCTTCAGACCACGTCCACACTGGCCAACCCCAGATCCCAAACGGTGAACATACTTTGTTCCACCGTGTTAGAGCATAATACAACGGCTTTTGTGCCAAACTTCGTTGCCACCATGCAAATAATCAGCGATCAAATGCGAACTGGTGGCTTTGGAGTGGCACTGGCAGGGAAAGGGCCGGACGCCAACTACGGCCTCGCTCAATGTTACGGAGATTTGTCGCTGATGGATTGTGTGTTATGTTATGCCGAAGCTCGTACTGTCCTGCCTCAGTGCTTTCCTTTCAATGGTGGCCGAATTTTCCTGGATGGCTGCTTCATGAGGGCTGAGAACTACAGCTTTTATAACGAATATAAGGGGCCTCTGGACAGGGCTGTGTGCGGCAACACCTCCATTACTACCAACTCCCTTTTTGGACAGTCGGCCAGGCAGGCTGTGGGCCGAGCAGTTGACATTGCACCCAACAATGGAGGGTATGCCAGAGTTGAAGTGCCTGTCCCTGGAACCTCCAATCTCTCGGTCTACCTGTTGGCTCAGTGCTGGAAGAATTTGAAACGCAGCTCCTGCACTTCCTGTTTGCAAAACGCCTCTGCTTCTATCCTCAAATGCTTGCCTCAGTCCGAAGCAAGGGCCCTCAACACTGGCTGCTTCATCAGATACTCTAGCGTTGACTTCCTAAATAGGGAAGCTCGAGCTGCAAGGTTCAGAGGTAACATTATAGCAATTGTAATCTCAGTGGTAAGCTCGATTGCTGTTTTGGTCGCTGGTGTGTTGATTGGAATCTACATCTTGAATAACAGATATGTAAAGATGAAACGAAAAGGTTCAAATGATGCAAACAAGATGGTGAAAACACTCAACAATAGCAGCTTGAATTTCAAGTACTCTACCCTTGAAAAGGCAACAGAATGTTTTGCTGAGGCTAACATGCTTGGACAAGGAGGATTTGGCACTGTTTATAAGGCCAGTCTTCTTATTGGAGTTCTGTCGGACGGAAGAGAGATAGCTGTGAAGAGGCTTTTCTTCAATAACAAACATAGAGCAGCAGACTTCTACAATGAAGTGAACATAATTAGTAGTGTGGAGCACAAAAATTTAGTAAGGTTGCTTGGCTGTAGTTGTTCTGGACCTGAAAGTCTACTCGTCTATGAATTCCTTCCCAACAAGAGCCTCGACCGCTTCATTTTTGATCGAGACAGAGGCAGATCACTCAATTGGGAGAAGAGATTTGATATTATCGTGGGAACAGTTGAAGGTTTGGCTTACCTGCACGAGAACTCGAAAACCAAGATCATTCACCGAGACATCAAGGCTAGTAACATCTTGCTTGACTCAAAGTTTCGAGCTAAAATTGCTGATTTTGGATTGGCTAGATCCTTTGAAGAAGATGTGAGCCACATCAGCACTGCCATTGCCGGAACCTTTTCTATATTACGAAGAAAGAAAGAAAGGAGAGTGATAAATATGATTGATGTGGGGAAACAGACATGGAAGCATTTTGAATCGGGAACAGTGGAAGGGATATACGACCCGAACCTGATGGTTGATGAGAAGGAGGGAGGTGGGAGCATAAAAGAGGAGATATTGAGAGTGGTGCACATAGGACTTCTGTGCACTCAGGAGACTGCATCACTGCGACCCACAATGTCAAAGGTACTGCAGATGCTGATGAAGAAGGAAGACAAACTTCCAGCGCCGACCAACCCGCCTTTCATGGACGAGAGGACAATGGAACTGAACGACACCAGCGACGCCCCGTCCCAGTACAACGTCACGGAAGGAAATAGAGCTCGGTTGATGAAGAAATGTGTAGACGTGGTGAAGGAGGAAGTGGGGTTTGCTATATTTGTGTACACTAATACTGCGTATAATCCAATTATCAGACTGAAACCCCCTTTCGCGCAAACTGTCACCCATTCCGCAGCTTCCCGACCTTCTTCGTCGTCGGCGGCGGCAGCAGCCTCCTTATTCAGAATCAAGCAGACAAACGGAACCCCAGATTCAATGGCGATCCAGCTTGTTTATGCTTGCAAATATGTCCTATTTTCGGTCCTCGCTCTTCTTCTGCTACACCTAACTTCGGCTGTGGGAAAGCCAAGAGATCAAACTGTGAAAGTGATTTGCGGGAAAGAACTAGAGCACAACACCACGGCGTACGTTCCAAATTTTTTTGGCTCAATGGAAAAAGTAAGACAACAAATCACAACTTCGGGATTTGGAACGGCGGGTACAGGAATAGGACCTGATGCCAGCTATGGGCTTGCCCAATGCCATGAAGATCTCTCATCCCACGAATGTGTGCTGTGTCATTCTCAAGCACGTACGGTGCTTCCCCAGTGCTTCCCTTTCAACGGTGGCCGTGCATTCATCGATGGCTGCTTCTTGAGGTTCGAAAACTATAGCTTTTTTGACGAATACAAAGGACCCGAAGACACTGCAGTTTGCGGGAACCTGACCCAAAATGACCCCAACTATAGACAAGCAGCCAGGGATGCGGTGATGCAAGTGGTCAACGGTGCACCAGGCAACAAAGGCTTTGCAAAAGCTCAAGTGGCTGTGGCCGGGATGGCGAAGGAGTCTGCCGTTTATGCTCTGGGTCAGTGCTGGAGAAGTTTGAGCCACAGCTCTTGCAGCTCGTGTTTGAAAATTGCTTCTGCCTCGATGCTGCAGCAGTGTTTACCTCGATTGGAAGGGCGAGCGTTGTACACAGGCTGCTTCATGAGATACTCAAACACAGACTTTCTCAATAAGGACATCAAAGATAGTTCCAAAGGTGGGACAATAACTGCGGGGATCATCATTTCAATTTTGAGTTCTGTTGTTGTTATGATAATCGTAGCGGTGATCGGTACTTTTATCTGGAGGCGCAGATACGTTCAAAATAAAAGGAAAGGAGGTTCAGCTGATGTGAAGAAGTTGGCGAAAACTCTTCAAGATAGTAATTTGAACTTCAAGTACTCAACCCTTGAAAAAGCTACCAACAATTTCAGCCTCGATAACAAGATTGGACAAGGGGGGTTTGGCTCTGTTTATAAGGGAACTCTACCTGATGGAAGAGAGATTGCTGTCAAGAGATTCTTCTTTGATAACAGACATAGAGCAGCAGATTTCTTCAATGAAGTCAACATGATCAGCAGTGTCGAACATAAAAATCTGGTTAGGTTGCTTGGATGCAGTTGTTCTGGACCTGAAAGCCTACTTGTTTATGAATTCCTGCCAAACAAGAGTCTCGATCGCTTCATTTTTGGTGCCAATAACAGCAAAGCTCTTGATTGGGATAAGAGATATAACATCATCATTGGCACGGTTGAAGGTTTAATATATCTACATGAAAATCCAGAGAACAAAATCATACACAGAGATATAAAGGCCAGTAATATCTTGCTCGATCTAAAGCTTCAAGCAAAAATAGCAGATTTTGGATTAGCAAGGTCTTTCCAAGAGAACAAGAGTCATATTAGCACCGCCATTGCAGGAACTCTAGGATATATGGCTCCGGAGTATCTAGCTTATGGTCAGCTAACAGAAAAGGTCGACGTCTATAGCTTTGGAGTGCTTTTGTTAGAAATAGTTACAGGATTCCAATACAGTGGCATCCAAGTCTCGGGAAATATTGAAAGTCTTGTCACTGCTATGTGGAGACATTTCCAAGCAGGCACGGTTGAGAGGCTATTTGATTCAAATCTAAATCTTCGGAATCACTACAACAAAAAAGTAAAGGACGAGGTATTGAGAGTGGTGCACATAGGGCTCTTATGCATTCAGGAGGTTCCATCTCTTCGACCAACAATGTCGAAGGTACTACGAATGCTGACCATGGAGGAGGAAGAGCACCTTCCTCCACCCACCAAACCGCCTTTCATGGATGAGATGACCATGGAACTTGATGGCTCATGCAAGGACTCGCAATATTGTTCTATTACAGAGGGCTCTTATTCAACTGCCACAGTCAGCCATAGTTCTTTTCATCCAAGATAA 4044 45.62 MNTASPLLPTYGFFIIFITALFLLQTTSTLANPRSQTVNILCSTVLEHNTTAFVPNFVATMQIISDQMRTGGFGVALAGKGPDANYGLAQCYGDLSLMDCVLCYAEARTVLPQCFPFNGGRIFLDGCFMRAENYSFYNEYKGPLDRAVCGNTSITTNSLFGQSARQAVGRAVDIAPNNGGYARVEVPVPGTSNLSVYLLAQCWKNLKRSSCTSCLQNASASILKCLPQSEARALNTGCFIRYSSVDFLNREARAARFRGNIIAIVISVVSSIAVLVAGVLIGIYILNNRYVKMKRKGSNDANKMVKTLNNSSLNFKYSTLEKATECFAEANMLGQGGFGTVYKASLLIGVLSDGREIAVKRLFFNNKHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDRDRGRSLNWEKRFDIIVGTVEGLAYLHENSKTKIIHRDIKASNILLDSKFRAKIADFGLARSFEEDVSHISTAIAGTFSILRRKKERRVINMIDVGKQTWKHFESGTVEGIYDPNLMVDEKEGGGSIKEEILRVVHIGLLCTQETASLRPTMSKVLQMLMKKEDKLPAPTNPPFMDERTMELNDTSDAPSQYNVTEGNRARLMKKCVDVVKEEVGFAIFVYTNTAYNPIIRLKPPFAQTVTHSAASRPSSSSAAAAASLFRIKQTNGTPDSMAIQLVYACKYVLFSVLALLLLHLTSAVGKPRDQTVKVICGKELEHNTTAYVPNFFGSMEKVRQQITTSGFGTAGTGIGPDASYGLAQCHEDLSSHECVLCHSQARTVLPQCFPFNGGRAFIDGCFLRFENYSFFDEYKGPEDTAVCGNLTQNDPNYRQAARDAVMQVVNGAPGNKGFAKAQVAVAGMAKESAVYALGQCWRSLSHSSCSSCLKIASASMLQQCLPRLEGRALYTGCFMRYSNTDFLNKDIKDSSKGGTITAGIIISILSSVVVMIIVAVIGTFIWRRRYVQNKRKGGSADVKKLAKTLQDSNLNFKYSTLEKATNNFSLDNKIGQGGFGSVYKGTLPDGREIAVKRFFFDNRHRAADFFNEVNMISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFGANNSKALDWDKRYNIIIGTVEGLIYLHENPENKIIHRDIKASNILLDLKLQAKIADFGLARSFQENKSHISTAIAGTLGYMAPEYLAYGQLTEKVDVYSFGVLLLEIVTGFQYSGIQVSGNIESLVTAMWRHFQAGTVERLFDSNLNLRNHYNKKVKDEVLRVVHIGLLCIQEVPSLRPTMSKVLRMLTMEEEEHLPPPTKPPFMDEMTMELDGSCKDSQYCSITEGSYSTATVSHSSFHPR 1347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 116852 124579 - Cp4.1LG07g00310.1 Cpe07g00019 471826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00019 1347 ProSiteProfiles Gnk2-homologous domain profile. 723 824 IPR002902 -
Cpe07g00019 1347 Gene3D - 34 136 IPR038408 -
Cpe07g00019 1347 Gene3D - 144 247 IPR038408 -
Cpe07g00019 1347 Gene3D - 723 824 IPR038408 -
Cpe07g00019 1347 Gene3D - 834 936 IPR038408 -
Cpe07g00019 1347 SUPERFAMILY Protein kinase-like (PK-like) 1002 1312 IPR011009 -
Cpe07g00019 1347 SUPERFAMILY Protein kinase-like (PK-like) 312 598 IPR011009 -
Cpe07g00019 1347 ProSitePatterns Protein kinases ATP-binding region signature. 333 360 IPR017441 GO:0005524
Cpe07g00019 1347 Pfam Protein kinase domain 1019 1291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00019 1347 ProSiteProfiles Gnk2-homologous domain profile. 35 136 IPR002902 -
Cpe07g00019 1347 ProSitePatterns Protein kinases ATP-binding region signature. 1024 1046 IPR017441 GO:0005524
Cpe07g00019 1347 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 516 610 - -
Cpe07g00019 1347 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 15 497 - -
Cpe07g00019 1347 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 703 1326 - -
Cpe07g00019 1347 ProSiteProfiles Gnk2-homologous domain profile. 142 247 IPR002902 -
Cpe07g00019 1347 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 516 610 - -
Cpe07g00019 1347 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 703 1326 - -
Cpe07g00019 1347 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 15 497 - -
Cpe07g00019 1347 ProSiteProfiles Protein kinase domain profile. 327 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00019 1347 Pfam Salt stress response/antifungal 844 933 IPR002902 -
Cpe07g00019 1347 Pfam Salt stress response/antifungal 51 134 IPR002902 -
Cpe07g00019 1347 Pfam Salt stress response/antifungal 154 243 IPR002902 -
Cpe07g00019 1347 Pfam Salt stress response/antifungal 741 822 IPR002902 -
Cpe07g00019 1347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1139 1151 IPR008271 GO:0004672|GO:0006468
Cpe07g00019 1347 Pfam Protein tyrosine and serine/threonine kinase 331 486 IPR001245 GO:0004672|GO:0006468
Cpe07g00019 1347 CDD STKc_IRAK 1024 1294 - -
Cpe07g00019 1347 Gene3D Phosphorylase Kinase; domain 1 287 407 - -
Cpe07g00019 1347 Gene3D Phosphorylase Kinase; domain 1 980 1093 - -
Cpe07g00019 1347 ProSiteProfiles Gnk2-homologous domain profile. 829 936 IPR002902 -
Cpe07g00019 1347 Gene3D Transferase(Phosphotransferase) domain 1 502 590 - -
Cpe07g00019 1347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Cpe07g00019 1347 Gene3D Transferase(Phosphotransferase) domain 1 408 501 - -
Cpe07g00019 1347 Gene3D Transferase(Phosphotransferase) domain 1 1094 1302 - -
Cpe07g00019 1347 ProSiteProfiles Protein kinase domain profile. 1018 1295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00019 1347 SMART serkin_6 1018 1295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00019 1347 SMART serkin_6 327 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00019 Cpe-Chr7:116852 Cpe15g00892 Cpe-Chr15:8578801 3.83E-55 dispersed
Cpe03g00576 Cpe-Chr3:3434589 Cpe07g00019 Cpe-Chr7:116852 1.12E-07 transposed
Cpe11g00025 Cpe-Chr11:139384 Cpe07g00019 Cpe-Chr7:116852 1.31E-178 wgd
Cpe07g00019 Cpe-Chr7:116852 Cpe09g00514 Cpe-Chr9:3425601 4.54E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62489 PF00069 Pkinase 1.20E-46 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00019 - - cmax:111492443 2040.39