Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g00029 | ATGTCAAAACCGTGGGGCGGAATTGGAGCCTGGGCTGCTGATGCCGAGCGTGCTGAGGCTGAGGAACGAGAGGCGGAAGCTGCTGCGGCCGCCTCCCAAGCAGAATCGAAGAATTTCCCTAGCCTTAAGGAAGCTGTCAACACCAAGCCCAAGAAGAAGAAGATGACGTTGTCGGAATTCACTATGGGGACCTTGACGGGCCCGGGCGCCGGCAGTAGGCAAACAGACAGCAAGGGCTTGACGCCGGAGGAGATGCTTCGACTTCCGACTGGTCCCAAAGACCGTTCTGGTGAAGAAATGCGTCCTGGTCGACTTGGTGGGGGATTTCCCACTTATGATCGGCACAGTATGCCTGCTGGTCGATTTCGAGACCGTGATGAAGGCGATGGGTCTTGGGGTGGTGGTCGACGATCGTTTGGTGGGTTCGATGATGATCGTAGGGATCCACCTCCTAGGGCTTCCAATTTCGATCAACCTTCCAGGGCTGACGAGGTGGATAATTGGGCAATGACTAAGAAATCTCCCACATTGGCTTCAGAGCGACAGAATAGGTACGGGTCGCTAGGCGGTGGTATGGGTGGAATTTCATCCAGGGCAGACGAGGTCGATAGCTGGGCCAGTGCGAAAAAACCTGTTCCATCGAGATCCTCCACTTTTGGTTCTGGTTACCGTGACCGTGAGGTGAATGAGCATGATCGCTGGACTAGAGGCAGTTCACGTGATAGTGACACAGAACGACCCCGGTTAGTATTGGATCGACCCAAAGCTAATCTCCTTACAAATGAAGCAACAAGGTCGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCAAGAGAGGAAGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGACCTTCGAGTGCTCAATCGAGCCGTTCAGAGGGTCCAGGATTGCAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTTGGGGATGCCAAGCCTAGGGAGGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGGAAGATAGATCTGCAACTTGAGCGTCGTGCTGTGGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTTCTAAGAAAGGAACTTGAGAAAGGCTTATCTCTGAATGCTAAGAAAGAATCGATGCAAGAATCTGCCGTAGAGATACAAGATCTGCGTGACAGAATAAATAAAAAAGAATGTGAACTGGAGGCGCTGGTCCTTGATTTGGATGATAAGGTACGCTTCGGGAAGAAAGCAGCTGAGAGACCTGGCTCTGGAGCAGGTAGGGCTGCTGTCTTTCCCGAAAGACAATCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTCGAGTCCATGGAACGGCCTCGATCACGTGGCACTCCAGATGTGTGGAGTAGATCTGCTGAGGATGGAAAACCAATACAAGGTGCCAGAGATGGAGGATTTTTGGGCAACAGAGACATGAACAGGTCGAGGGATAGTAGATGGTAA | 1563 | 51.44 | MSKPWGGIGAWAADAERAEAEEREAEAAAAASQAESKNFPSLKEAVNTKPKKKKMTLSEFTMGTLTGPGAGSRQTDSKGLTPEEMLRLPTGPKDRSGEEMRPGRLGGGFPTYDRHSMPAGRFRDRDEGDGSWGGGRRSFGGFDDDRRDPPPRASNFDQPSRADEVDNWAMTKKSPTLASERQNRYGSLGGGMGGISSRADEVDSWASAKKPVPSRSSTFGSGYRDREVNEHDRWTRGSSRDSDTERPRLVLDRPKANLLTNEATRSNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLERRAVDRPETEEEKMLKEEIDVLRKELEKGLSLNAKKESMQESAVEIQDLRDRINKKECELEALVLDLDDKVRFGKKAAERPGSGAGRAAVFPERQSSQGSFDESRSFESMERPRSRGTPDVWSRSAEDGKPIQGARDGGFLGNRDMNRSRDSRW | 520 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 153899 | 159120 | - | Cp4.1LG07g00350.1 | Cpe07g00029 | 471836 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g00029 | 520 | MobiDBLite | consensus disorder prediction | 59 | 79 | - | - | |
Cpe07g00029 | 520 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 520 | IPR010433 | GO:0003743 | |
Cpe07g00029 | 520 | Coils | Coil | 15 | 37 | - | - | |
Cpe07g00029 | 520 | MobiDBLite | consensus disorder prediction | 278 | 304 | - | - | |
Cpe07g00029 | 520 | MobiDBLite | consensus disorder prediction | 117 | 132 | - | - | |
Cpe07g00029 | 520 | MobiDBLite | consensus disorder prediction | 442 | 520 | - | - | |
Cpe07g00029 | 520 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 | 1 | 520 | - | - | |
Cpe07g00029 | 520 | MobiDBLite | consensus disorder prediction | 471 | 489 | - | - | |
Cpe07g00029 | 520 | MobiDBLite | consensus disorder prediction | 1 | 346 | - | - | |
Cpe07g00029 | 520 | Pfam | Plant specific eukaryotic initiation factor 4B | 1 | 505 | IPR010433 | GO:0003743 | |
Cpe07g00029 | 520 | MobiDBLite | consensus disorder prediction | 305 | 324 | - | - | |
Cpe07g00029 | 520 | Coils | Coil | 398 | 432 | - | - | |
Cpe07g00029 | 520 | MobiDBLite | consensus disorder prediction | 224 | 252 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g00029 | Cpe-Chr7:153899 | Cpe16g00301 | Cpe-Chr16:4947554 | 3.81E-06 | dispersed | |
Cpe11g00037 | Cpe-Chr11:182688 | Cpe07g00029 | Cpe-Chr7:153899 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g00029 | - | - | csv:101206526 | 770.0 |