Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00029 ATGTCAAAACCGTGGGGCGGAATTGGAGCCTGGGCTGCTGATGCCGAGCGTGCTGAGGCTGAGGAACGAGAGGCGGAAGCTGCTGCGGCCGCCTCCCAAGCAGAATCGAAGAATTTCCCTAGCCTTAAGGAAGCTGTCAACACCAAGCCCAAGAAGAAGAAGATGACGTTGTCGGAATTCACTATGGGGACCTTGACGGGCCCGGGCGCCGGCAGTAGGCAAACAGACAGCAAGGGCTTGACGCCGGAGGAGATGCTTCGACTTCCGACTGGTCCCAAAGACCGTTCTGGTGAAGAAATGCGTCCTGGTCGACTTGGTGGGGGATTTCCCACTTATGATCGGCACAGTATGCCTGCTGGTCGATTTCGAGACCGTGATGAAGGCGATGGGTCTTGGGGTGGTGGTCGACGATCGTTTGGTGGGTTCGATGATGATCGTAGGGATCCACCTCCTAGGGCTTCCAATTTCGATCAACCTTCCAGGGCTGACGAGGTGGATAATTGGGCAATGACTAAGAAATCTCCCACATTGGCTTCAGAGCGACAGAATAGGTACGGGTCGCTAGGCGGTGGTATGGGTGGAATTTCATCCAGGGCAGACGAGGTCGATAGCTGGGCCAGTGCGAAAAAACCTGTTCCATCGAGATCCTCCACTTTTGGTTCTGGTTACCGTGACCGTGAGGTGAATGAGCATGATCGCTGGACTAGAGGCAGTTCACGTGATAGTGACACAGAACGACCCCGGTTAGTATTGGATCGACCCAAAGCTAATCTCCTTACAAATGAAGCAACAAGGTCGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCAAGAGAGGAAGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGACCTTCGAGTGCTCAATCGAGCCGTTCAGAGGGTCCAGGATTGCAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTTGGGGATGCCAAGCCTAGGGAGGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGGAAGATAGATCTGCAACTTGAGCGTCGTGCTGTGGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTTCTAAGAAAGGAACTTGAGAAAGGCTTATCTCTGAATGCTAAGAAAGAATCGATGCAAGAATCTGCCGTAGAGATACAAGATCTGCGTGACAGAATAAATAAAAAAGAATGTGAACTGGAGGCGCTGGTCCTTGATTTGGATGATAAGGTACGCTTCGGGAAGAAAGCAGCTGAGAGACCTGGCTCTGGAGCAGGTAGGGCTGCTGTCTTTCCCGAAAGACAATCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTCGAGTCCATGGAACGGCCTCGATCACGTGGCACTCCAGATGTGTGGAGTAGATCTGCTGAGGATGGAAAACCAATACAAGGTGCCAGAGATGGAGGATTTTTGGGCAACAGAGACATGAACAGGTCGAGGGATAGTAGATGGTAA 1563 51.44 MSKPWGGIGAWAADAERAEAEEREAEAAAAASQAESKNFPSLKEAVNTKPKKKKMTLSEFTMGTLTGPGAGSRQTDSKGLTPEEMLRLPTGPKDRSGEEMRPGRLGGGFPTYDRHSMPAGRFRDRDEGDGSWGGGRRSFGGFDDDRRDPPPRASNFDQPSRADEVDNWAMTKKSPTLASERQNRYGSLGGGMGGISSRADEVDSWASAKKPVPSRSSTFGSGYRDREVNEHDRWTRGSSRDSDTERPRLVLDRPKANLLTNEATRSNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLERRAVDRPETEEEKMLKEEIDVLRKELEKGLSLNAKKESMQESAVEIQDLRDRINKKECELEALVLDLDDKVRFGKKAAERPGSGAGRAAVFPERQSSQGSFDESRSFESMERPRSRGTPDVWSRSAEDGKPIQGARDGGFLGNRDMNRSRDSRW 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 153899 159120 - Cp4.1LG07g00350.1 Cpe07g00029 471836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00029 520 MobiDBLite consensus disorder prediction 59 79 - -
Cpe07g00029 520 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 520 IPR010433 GO:0003743
Cpe07g00029 520 Coils Coil 15 37 - -
Cpe07g00029 520 MobiDBLite consensus disorder prediction 278 304 - -
Cpe07g00029 520 MobiDBLite consensus disorder prediction 117 132 - -
Cpe07g00029 520 MobiDBLite consensus disorder prediction 442 520 - -
Cpe07g00029 520 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 520 - -
Cpe07g00029 520 MobiDBLite consensus disorder prediction 471 489 - -
Cpe07g00029 520 MobiDBLite consensus disorder prediction 1 346 - -
Cpe07g00029 520 Pfam Plant specific eukaryotic initiation factor 4B 1 505 IPR010433 GO:0003743
Cpe07g00029 520 MobiDBLite consensus disorder prediction 305 324 - -
Cpe07g00029 520 Coils Coil 398 432 - -
Cpe07g00029 520 MobiDBLite consensus disorder prediction 224 252 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00029 Cpe-Chr7:153899 Cpe16g00301 Cpe-Chr16:4947554 3.81E-06 dispersed
Cpe11g00037 Cpe-Chr11:182688 Cpe07g00029 Cpe-Chr7:153899 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00029 - - csv:101206526 770.0