Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00037 ATGGCTTCCTTATCTCCTTGTCGCCCAAATTTTATGTTCTCTTCATTTCCGAACCGTGTTCCGACCTCAAATCCTCCATTTCATGCGGTCCAATTCCGAGGTTTATCCCACCACAAGCCCTTCCTTCGCGGTTCCCTTGGCGTTGCGAGATTCGGGTTCAAACCCGAGTTCTTGCCTGACCCAGATAACGCCGAGGGCTTTGTGAGGGAGTTGTTCGGCAAAGCTGAGAGCGTTCTGTATACGATAGCCGACGCCGCCGTGTCTGCTTCGCCGGAAGATGTGACCACCGCCAAGCAAAGTGAGGATTGGTTTACGGGGATTACCAATTACATGGAGAGCGTCCTTAAAATTCTTGAGAATGGACTTTCTACTCTGCATGTTCCTTATGCCTATGGTTTTGCCATTATACTCCTTACAGTTCTTGTTAAGGCTGCCACATTTCCTTTGTCAAAGAAGCAGGTAGAATCTGCAACGGCAATGCGTTCGTTGCAACCGCAAGTAAAGGCCGTTCAGCAACGTTATGCCGGGGATCAGGAGAGGATTCAAATTGAAACTGCTCGACTCTACAAATTAGCTGGAATAAACCCGTTTGCAGGATGCCTACCCACGTTGGCTACAATCCCTGTATGGATTGGACTATACAGAGCTCTTTCAAATGTGGCCAATGAGGGTCTCCTCACAGAAGGCTTTTTCTGGATACCGTCTCTGGCTGGTCCAACTACGATCGTTTCTCGACAAAGTGGGAGTGGTATCTCTTGGCTCTTTCCATTTGTTGATGGTCATCCACCACTTGGGTGGTCAGATACCTTGGCATATCTTGTCTTGCCTGTGTTGCTGGTTGTGTCGCAGTACATCTCGGTTCAGATTATGCAATCGACGCAGAATAATGATCCAAACATGAAGAGTTCTCAAGCCATAACGCAGTTCCTACCGTTAATGATTGGATATTTTGCACTTTCAGTTCCTTCTGGTCTAAGTCTTTATTGGCTTACCAATAACATCTTGAGCACAGCTCAGCAAGCATGGCTTCAAAAGTCAGGTGGTGCAAAAACCCCGGACAAACGGTTCATCGATGAAAGCATCAAACAAGAACAAGCCCGAGTCCAGATCCAATCGCCCGAGTTAAAGTCAGTTTCGATGAGCACAGTAGCCAGAGAATCAGAGAAGCCAACAGCAGAAGGGGTAAAACCTGGTGAAAGATTTAAACAGATAAAGGAGCAAGAGGCTAGGATAAGACAACAAAGAGAAGAAGAAAAGAGGAAAGCTGAAGAGGCAGCCAAGCTTGAATCTCAGACAATAAATGACAGTGACAAGAGCGCAGCTGCTAGATTTGTTGTCAATGGCAGTCTTTCTAGACAGGATATGGAGGAAGTTCAAAACTCCATGTCCACATCTACTATGCTGCATAGAACCGACGTGGACGACGAGGTTAGCGATACAAGCGAGCCTCTGCCAAGTGTAACTCAGGAAGAGAACGTAGTCGAGACGTACACCGGTGTGGGCAAGGAAGCCAAACTAAATGGAGAAGATCAAGGAGAGTAA 1542 47.02 MASLSPCRPNFMFSSFPNRVPTSNPPFHAVQFRGLSHHKPFLRGSLGVARFGFKPEFLPDPDNAEGFVRELFGKAESVLYTIADAAVSASPEDVTTAKQSEDWFTGITNYMESVLKILENGLSTLHVPYAYGFAIILLTVLVKAATFPLSKKQVESATAMRSLQPQVKAVQQRYAGDQERIQIETARLYKLAGINPFAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIVSRQSGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSTQNNDPNMKSSQAITQFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKSGGAKTPDKRFIDESIKQEQARVQIQSPELKSVSMSTVARESEKPTAEGVKPGERFKQIKEQEARIRQQREEEKRKAEEAAKLESQTINDSDKSAAARFVVNGSLSRQDMEEVQNSMSTSTMLHRTDVDDEVSDTSEPLPSVTQEENVVETYTGVGKEAKLNGEDQGE 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 190659 194705 - Cp4.1LG07g00560.1 Cpe07g00037 471844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00037 513 MobiDBLite consensus disorder prediction 452 468 - -
Cpe07g00037 513 Coils Coil 401 432 - -
Cpe07g00037 513 MobiDBLite consensus disorder prediction 377 434 - -
Cpe07g00037 513 Pfam 60Kd inner membrane protein 131 345 IPR001708 GO:0016021|GO:0032977
Cpe07g00037 513 MobiDBLite consensus disorder prediction 389 431 - -
Cpe07g00037 513 MobiDBLite consensus disorder prediction 452 491 - -
Cpe07g00037 513 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 131 345 IPR028055 -
Cpe07g00037 513 PANTHER OXA1 48 432 IPR001708 GO:0016021|GO:0032977
Cpe07g00037 513 PANTHER BNAA09G28180D PROTEIN 48 432 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00037 Cpe-Chr7:190659 Cpe01g00619 Cpe-Chr1:3570770 5.49E-11 dispersed
Cpe02g01243 Cpe-Chr2:11164738 Cpe07g00037 Cpe-Chr7:190659 1.48E-134 transposed
Cpe11g00044 Cpe-Chr11:225665 Cpe07g00037 Cpe-Chr7:190659 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00037 K03217 - csv:101205346 805.053