Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00074 ATGGACGGAGGAGCTTCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGTCTGTTCCGCCGCCGCAGCATGACCCGGCGGGACACCAGCCACCACCGATGGGGATGGAAAATATTCCGGCGACTTTGAGCCATGGAGGGCGATTCATTCAGTACAACATCTTTGGGAACATCTTTGAAGTTACGGCTAAGTACAAGCCTCCAATCATGCCTATTGGCAAAGGCGCTTACGGCATCGTCTGTTCTTCTCTCAACTCCGAGACGAACGAGCATGTGGCGATCAAGAAGATTGCTAATGCGTTTGACAACAAGATCGATGCTAAGAGAACTCTTCGCGAGATCAAGCTGCTTCGGCACATGGATCATGAAAACGTTGTTGCAATTAGGGATATCATTCCTCCACCTCTAAGGGAAACGTTTAATGATGTTTACATAGCATATGAGTTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCACTGTCAGTACTTCCTGTACCAGATTCTTCGTGGATTGAAGTACATACATTCAGCAAATGTTCTACACAGAGATTTGAAGCCTTCCAATCTGCTCTTAAATGCCAACTGTGACCTGAAAATATGCGATTTTGGGCTTGCTCGTGTTACTTCTGAAACTGACTTTATGACGGAATATGTGGTTACTAGATGGTACCGTGCTCCAGAGCTCTTACTTAATTCTTCTGATTACACAGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCCTTGTTTCCTGGTCGAGATCATGTGCATCAGTTACGCTTGCTTTTGGAGCTGATAGGCACTCCATCAGAGGCTGATCTTGGTTTCTTGAACGAGAACGCTAAAAGATACATACGACAACTTCCTCACTACCATCGGCAGTCATTCACTGAAAAATTTCCACATGTTCATCCTTCAGCCATTGATCTGGTGGAGAAGATGCTAGCATTTGATCCTGGACAGAGAATTACCGTTGAAGATGCTCTAGCTCATCCTTATTTGACTTCATTGCACGACATTAGTGACGAGCCTGTGTGCATGACACCCTTCAGCTTTGATTTCGAGCAGCACGCTCTCACTGAGGAACAAATGAAAGAGCTGATCTACCGAGAGGCACTTGCATTTAACCCCGAGTATCATCAACAATAA 1200 45.67 MDGGASQPDDTVMSEAASVPPPQHDPAGHQPPPMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSSLNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLGFLNENAKRYIRQLPHYHRQSFTEKFPHVHPSAIDLVEKMLAFDPGQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYHQQ 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 358653 365234 + Cp4.1LG07g00660.1 Cpe07g00074 471881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00074 399 Pfam Protein kinase domain 71 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00074 399 MobiDBLite consensus disorder prediction 1 37 - -
Cpe07g00074 399 Gene3D Phosphorylase Kinase; domain 1 49 388 - -
Cpe07g00074 399 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00074 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Cpe07g00074 399 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 31 397 - -
Cpe07g00074 399 Gene3D Transferase(Phosphotransferase) domain 1 150 378 - -
Cpe07g00074 399 SMART serkin_6 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00074 399 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 31 397 - -
Cpe07g00074 399 ProSitePatterns Protein kinases ATP-binding region signature. 72 96 IPR017441 GO:0005524
Cpe07g00074 399 ProSitePatterns MAP kinase signature. 101 204 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe07g00074 399 SUPERFAMILY Protein kinase-like (PK-like) 71 359 IPR011009 -
Cpe07g00074 399 CDD STKc_TEY_MAPK 59 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01275 Cpe-Chr2:11398202 Cpe07g00074 Cpe-Chr7:358653 4.34E-155 dispersed
Cpe07g00074 Cpe-Chr7:358653 Cpe13g00136 Cpe-Chr13:984706 0 dispersed
Cpe11g00373 Cpe-Chr11:2047885 Cpe07g00074 Cpe-Chr7:358653 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62490 PF00069 Pkinase 1.20E-72 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00074 K14512 - csv:101204301 799.66