Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe07g00079 | ATGGGGACGAAAGTGCAATGCAAAAGTTCCTTGCCAGGCTTTTACCCAATGAGGGAACTTAACAATGATACTAACAGCCATAATTGGCATCTATTTTATGGTGAAAGAGCCTTCACAAATGCACAATATCCCAATGTGTTCTTACCAAGAACTAGCACCAATGGATATCTAGGCGATGATAAGGATGCAGTGAAGCAGAAAATGCTTGAACATGAGGCCATCTTCAAGAATCAGGTGTTCGAACTGCATCGTCTATACCGAAAACAACGAGATCTAATGGCTAAGATCAAATCTACAGAGCTTTGCAGAAATCAGTTAGCTGTAGACTCATTGCTCTCTTCTAGCCCCATGACATCTCAAGTTACTTCTGAAGATGGTTCGAGACGGAATCTGCCATATTTTCGTGTGGCGAATTCGTCTAATGCCAGGTTTTCTATTTCAGGTGTTGAAGAAGTTCATTCTTCTATGATTTCTAGCCAGAAGCCTTGTTTTTTTTCACTACAAAACGACACGAGGGACTTGCAGGTTCTCGAATCCCGACCGACAAAGTTTAGACGAAAAGTGTTGGATCTTCAGCTCCCTGCTGATGAGTATATTGATAGTGAGCCTGACATATCAAGTCACCATCACAACAAGGACCAAATGATTGATCTTGGAAGGGATATCAAGTTCTATGCTGCTGATGATGGCGAGCGGACTGGTTGCCTGCGAAACGCTCGTAAATCGGGCACTCGTTTTGAAAAGAATACGAGTTGTTTAAGTGATTTGGATAATAATAACATTCTTCAAGGACTTCAAACTAAAAGATGGCCTGTTTCTTCTCAACCTGTAAGTTCTCTCTATGAACTTAATGAAGCTCCACTGTTTCATTCAACAGATAAAGATAGCGTAGAACAGTCGAGAGACGGGTCGGTTTTCGGTTTGCAGTTTACCAAAAGATGTCATGAGAAGATCAAGGGTGAACCATTGAGCTCGAGCTCGTTCGTCCCTACGCATACGTCCACACCACAGCTCGCTGCTCCTGATTTTAGTAAGCTATCATACTATAACAGGGCTGTTCTTGGGTGTTCATCTGAGTTCAAGGAAGAAATGGGGCACCCCTCTTCTGTCAGCTGCAACTTTTGGAAACAGGGTAATGGTAACGATCGAACTCCGACAGACTCGAGCCCTTCCGTTGCGTTGAAACTCCTCGAGGACTCGAGTTCTGTGGACGTGAAATGTACAAAAGAGAGAGGTTTTAAGGAAAATTGTACATTGTTGCCTTGGCTCAGAGGGAAAACTGGTCATTTGCTTAGTGATGATATCTTCAACAAAGAGTTTGAATCAGACATGTCTTGTAAATCAGTTTCTGAAGGATTGCAGGATCCCAAGAAAGCAGTATTTGATATCAACTTGCCTTGTGATCCTTTGGTTGCTGAATTGAATGAAGCAAAAGTTCTCATTGATTTGAACTTGAGTCTAAGCGACGACGAAGAACGTTTGATACCGACACCTAAATCGAATGTCCGAACGTGGGGAGAGATAGATTTGGAGGAGGCTCCTGCAAGTTCTGATGAAATTATAGAAACAACGCCCGAATTAGACTCGAAACGGCGATATGAAGGCGTAAACGAACAAGATGGGGTCATGGAATTAGCAGCAGAGGCAATAGTTTCCATTGCTTCATCTGTTTGTGACAGCCATTTGGAGGATTGTATGGACAATGGCTTTGATTTGTTGGTGGAGATGGCTGTCTTATATTCAAATGAGTATGAAGAAGGGATGGATTCGTTTGAATCCATGACATTGGGACTAGCAGAAGCCAAGGCAGAGGAGTATATGCCTAAGCCACTGGTTCTTCCAGGGCATATAACAATGGAAGAAGATGCAGCTAAGGTACTGCAAGGCCGCCCTCGGAAAGGGCAGGCGAGGCGAGGCAGGCAACGGAGGGACTTCCAAAGGGACATACTTCCAGGCCTTACTTCTCTATCAAGACAAGAAGTTACAGAAGATCTTAACACATTTGGAGGGCTAATGAGGGCAATGGGTCATGAGTGGAATTCGGGCTCGACGAAGAGGAACTCGTCGAGAAACGCTGCGTGTGGCAGAGGAAGGCGACGATCCATGACTAGCAGCAGCAGCAGCCCCTCCACACAGCCAGCTGAGAATGTTCCTAGTAATGCTGATGCTGCTGATGAGATGATGGGAGTTGACAATAGGAGGCTGACAGGGTGGGGGAAGACGACGAGACGGCCCCGTCGACGACAACGAGTCCCGGTCGGTAATCTTGCAACGATTGTGCTTTAA | 2286 | 44.97 | MGTKVQCKSSLPGFYPMRELNNDTNSHNWHLFYGERAFTNAQYPNVFLPRTSTNGYLGDDKDAVKQKMLEHEAIFKNQVFELHRLYRKQRDLMAKIKSTELCRNQLAVDSLLSSSPMTSQVTSEDGSRRNLPYFRVANSSNARFSISGVEEVHSSMISSQKPCFFSLQNDTRDLQVLESRPTKFRRKVLDLQLPADEYIDSEPDISSHHHNKDQMIDLGRDIKFYAADDGERTGCLRNARKSGTRFEKNTSCLSDLDNNNILQGLQTKRWPVSSQPVSSLYELNEAPLFHSTDKDSVEQSRDGSVFGLQFTKRCHEKIKGEPLSSSSFVPTHTSTPQLAAPDFSKLSYYNRAVLGCSSEFKEEMGHPSSVSCNFWKQGNGNDRTPTDSSPSVALKLLEDSSSVDVKCTKERGFKENCTLLPWLRGKTGHLLSDDIFNKEFESDMSCKSVSEGLQDPKKAVFDINLPCDPLVAELNEAKVLIDLNLSLSDDEERLIPTPKSNVRTWGEIDLEEAPASSDEIIETTPELDSKRRYEGVNEQDGVMELAAEAIVSIASSVCDSHLEDCMDNGFDLLVEMAVLYSNEYEEGMDSFESMTLGLAEAKAEEYMPKPLVLPGHITMEEDAAKVLQGRPRKGQARRGRQRRDFQRDILPGLTSLSRQEVTEDLNTFGGLMRAMGHEWNSGSTKRNSSRNAACGRGRRRSMTSSSSSPSTQPAENVPSNADAADEMMGVDNRRLTGWGKTTRRPRRRQRVPVGNLATIVL | 761 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 383453 | 387888 | + | Cp4.1LG07g00790.1 | Cpe07g00079 | 471886 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe07g00079 | 761 | MobiDBLite | consensus disorder prediction | 627 | 651 | - | - | |
| Cpe07g00079 | 761 | MobiDBLite | consensus disorder prediction | 698 | 718 | - | - | |
| Cpe07g00079 | 761 | PANTHER | TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED | 480 | 755 | - | - | |
| Cpe07g00079 | 761 | PANTHER | TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED | 1 | 380 | - | - | |
| Cpe07g00079 | 761 | MobiDBLite | consensus disorder prediction | 677 | 750 | - | - | |
| Cpe07g00079 | 761 | PANTHER | - | 480 | 755 | - | - | |
| Cpe07g00079 | 761 | PANTHER | - | 1 | 380 | - | - | |
| Cpe07g00079 | 761 | Pfam | Plant protein of unknown function (DUF863) | 142 | 210 | IPR008581 | - | |
| Cpe07g00079 | 761 | Pfam | Plant protein of unknown function (DUF863) | 478 | 566 | IPR008581 | - | |
| Cpe07g00079 | 761 | Pfam | Plant protein of unknown function (DUF863) | 582 | 752 | IPR008581 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe07g00079 | Cpe09g00208 | CCT | |
| Cpe01g01494 | Cpe07g00079 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe07g00079 | Cpe-Chr7:383453 | Cpe09g00208 | Cpe-Chr9:1207425 | 1.36E-44 | dispersed | |
| Cpe05g00240 | Cpe-Chr5:1358139 | Cpe07g00079 | Cpe-Chr7:383453 | 2.19E-09 | transposed | |
| Cpe11g00381 | Cpe-Chr11:2097602 | Cpe07g00079 | Cpe-Chr7:383453 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe07g00079 | - | - | cmos:111454176 | 1391.33 |