Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00080 ATTTTGCTTTTACTTTATAAATTTGTAGGTGAAATATTTTGTAGGCGGAATAAGGTAAAAAAGAAGGGGCAAAAGCGAATCCGGCAGCCACGATTTGCATTCATGACCAAAAGCGAAGTGGATCATCTTGAAGATGGCTACCGTTGGAGGAAATATGGTCAAAAGGCTGTCAAAAATAGTCCATTTCCCAGGAGTTATTATAGGTGCACCAACAGCAAATGCACCGTGAAGAAAAGGGTAGAACGCTCGTCTGATGATCCAACGGTTGTGATTACAACTTACGAAGGTCAACACTGTCATCACACCGTTGGATTCCCTCGTGGAGGAGGACTCAACATGGCTCATGAACCTGCTTTTGGGACTCAATTTTCCCCTCATATGGCTCAGTTCTTTTACCCTGAACCTCACCCACCGCCCACAGTTACCCCTCCAAATGCTCCCAATTTGCCATCAGTGGCACCGTCCCAAGAACAGCCTCCAAATTCTTCACCCCAAGTGGCTTCGGATGAGGGCTTACTAGGCGACGTTGTGGCGCCAGGCATGCGTAGAAGATGA 555 46.85 ILLLLYKFVGEIFCRRNKVKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPTVVITTYEGQHCHHTVGFPRGGGLNMAHEPAFGTQFSPHMAQFFYPEPHPPPTVTPPNAPNLPSVAPSQEQPPNSSPQVASDEGLLGDVVAPGMRRR 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 389969 391304 - Cp4.1LG07g00870.1 Cpe07g00080 471887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00080 184 Pfam WRKY DNA -binding domain 44 100 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe07g00080 184 ProSiteProfiles WRKY domain profile. 38 103 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe07g00080 184 MobiDBLite consensus disorder prediction 129 184 - -
Cpe07g00080 184 MobiDBLite consensus disorder prediction 131 154 - -
Cpe07g00080 184 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 134 IPR044810 GO:0003700
Cpe07g00080 184 Gene3D WRKY domain 30 96 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe07g00080 184 SUPERFAMILY WRKY DNA-binding domain 35 101 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe07g00080 184 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 17 134 - -
Cpe07g00080 184 SMART WRKY_cls 43 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00080 Cpe-Chr7:389969 Cpe12g00331 Cpe-Chr12:2190645 5.74E-52 dispersed
Cpe11g00383 Cpe-Chr11:2106104 Cpe07g00080 Cpe-Chr7:389969 5.89E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49704 PF03106 WRKY 9.60E-26 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00080 - - mcha:111004648 261.536