Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g00080 | ATTTTGCTTTTACTTTATAAATTTGTAGGTGAAATATTTTGTAGGCGGAATAAGGTAAAAAAGAAGGGGCAAAAGCGAATCCGGCAGCCACGATTTGCATTCATGACCAAAAGCGAAGTGGATCATCTTGAAGATGGCTACCGTTGGAGGAAATATGGTCAAAAGGCTGTCAAAAATAGTCCATTTCCCAGGAGTTATTATAGGTGCACCAACAGCAAATGCACCGTGAAGAAAAGGGTAGAACGCTCGTCTGATGATCCAACGGTTGTGATTACAACTTACGAAGGTCAACACTGTCATCACACCGTTGGATTCCCTCGTGGAGGAGGACTCAACATGGCTCATGAACCTGCTTTTGGGACTCAATTTTCCCCTCATATGGCTCAGTTCTTTTACCCTGAACCTCACCCACCGCCCACAGTTACCCCTCCAAATGCTCCCAATTTGCCATCAGTGGCACCGTCCCAAGAACAGCCTCCAAATTCTTCACCCCAAGTGGCTTCGGATGAGGGCTTACTAGGCGACGTTGTGGCGCCAGGCATGCGTAGAAGATGA | 555 | 46.85 | ILLLLYKFVGEIFCRRNKVKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPTVVITTYEGQHCHHTVGFPRGGGLNMAHEPAFGTQFSPHMAQFFYPEPHPPPTVTPPNAPNLPSVAPSQEQPPNSSPQVASDEGLLGDVVAPGMRRR | 184 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 389969 | 391304 | - | Cp4.1LG07g00870.1 | Cpe07g00080 | 471887 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g00080 | 184 | Pfam | WRKY DNA -binding domain | 44 | 100 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe07g00080 | 184 | ProSiteProfiles | WRKY domain profile. | 38 | 103 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe07g00080 | 184 | MobiDBLite | consensus disorder prediction | 129 | 184 | - | - | |
Cpe07g00080 | 184 | MobiDBLite | consensus disorder prediction | 131 | 154 | - | - | |
Cpe07g00080 | 184 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 17 | 134 | IPR044810 | GO:0003700 | |
Cpe07g00080 | 184 | Gene3D | WRKY domain | 30 | 96 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe07g00080 | 184 | SUPERFAMILY | WRKY DNA-binding domain | 35 | 101 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe07g00080 | 184 | PANTHER | WRKY TRANSCRIPTION FACTOR 48-RELATED | 17 | 134 | - | - | |
Cpe07g00080 | 184 | SMART | WRKY_cls | 43 | 102 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g00080 | Cpe-Chr7:389969 | Cpe12g00331 | Cpe-Chr12:2190645 | 5.74E-52 | dispersed | |
Cpe11g00383 | Cpe-Chr11:2106104 | Cpe07g00080 | Cpe-Chr7:389969 | 5.89E-88 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49704 | PF03106 | WRKY | 9.60E-26 | CL0274 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g00080 | - | - | mcha:111004648 | 261.536 |