Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe07g00085 | ATGGCGGTTCTCTTGTTCTTTTCCTTGATGTTCATGGCCTTCACCTCTCATTCAGATGCTATATATTGTGTTTGTAAAGATGGATTAAGCGACCAAGCCCTTCAAAAATCACTGGATTATGCTTGTGGAGCTGGAGCCGATTGTTCTCCAATCCTTCAAAATGGGGTTTGTTTTCAGCCTAATACTGTCAAAGATCATTGTAGCTATGCTGTTAATAGCTACTTTCAGCGCAAGGGTCAAGTCCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGGCTAGCCAGTCTCCTCCTGCTGGAGCTTCTGGGTGTGTTTATCCTTCAAGTCCCAGCAACGCAGGAACCCCGTCGACCACCGTCCCGGGCACGACGCCAGGAACAATCACGAACCCATCAACAACACCACCCTCAACCATGACCCCAGGCATCACACCACCCTCAACCATGACCCCAGGTATCACCCCGCCCTCGGTGTTCGGGGGCGGGATAAGCCCGACAGGCGGGGTCGGGCTCGGTGGTAGCGGGAGTAGCATGGATGGAAGCGCTGCCATTGCAGCAGCAGGCTGTAACATGTTGTTGTTGTTCATAGCCATTGTGACATCTTTGTTGTAA | 612 | 51.47 | MAVLLFFSLMFMAFTSHSDAIYCVCKDGLSDQALQKSLDYACGAGADCSPILQNGVCFQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMASQSPPAGASGCVYPSSPSNAGTPSTTVPGTTPGTITNPSTTPPSTMTPGITPPSTMTPGITPPSVFGGGISPTGGVGLGGSGSSMDGSAAIAAAGCNMLLLFIAIVTSLL | 203 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 413020 | 415662 | - | Cp4.1LG07g00850.1 | Cpe07g00085 | 471892 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe07g00085 | 203 | PANTHER | BETA-1,3 GLUCANASE | 1 | 196 | IPR044788 | - | |
| Cpe07g00085 | 203 | Pfam | X8 domain | 22 | 92 | IPR012946 | - | |
| Cpe07g00085 | 203 | Gene3D | - | 15 | 110 | - | - | |
| Cpe07g00085 | 203 | SMART | X8_cls | 21 | 106 | IPR012946 | - | |
| Cpe07g00085 | 203 | MobiDBLite | consensus disorder prediction | 108 | 138 | - | - | |
| Cpe07g00085 | 203 | PANTHER | PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1 | 1 | 196 | - | - | |
| Cpe07g00085 | 203 | MobiDBLite | consensus disorder prediction | 108 | 137 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe01g01504 | Cpe07g00085 | CCT | |
| Cpe07g00085 | Cpe09g00219 | CCT | |
| Cpe01g01504 | Cpe07g00085 | ECH | |
| Cpe07g00085 | Cpe09g00219 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g01504 | Cpe-Chr1:8973367 | Cpe07g00085 | Cpe-Chr7:413020 | 1.35E-48 | dispersed | |
| Cpe07g00085 | Cpe-Chr7:413020 | Cpe09g00219 | Cpe-Chr9:1257760 | 3.58E-63 | dispersed | |
| Cpe11g00388 | Cpe-Chr11:2138795 | Cpe07g00085 | Cpe-Chr7:413020 | 1.24E-75 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe07g00085 | - | - | csv:116404331 | 216.853 |