Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00088 ATGGTCTCTTCACTAATGGCTGTTTCTCATCATCCGCTCCAACTGAATTCGAATTTGAAGGAGCCGCTCTGTCGTCGACAATGGACAGGTTCTAGCACTTCCAAAGTTTTGTCAAAATTTGAACTCCGATCCTTTTCAGCTTCGTTCTTCTGCAGTTCAGTTCAGATATCGGTTGTGATGAGACCCCTGGAATTTCTCTGCCTGGGAATATTATGGATTCTAGCGACACTGCAACAAGTCAAATCACATGGAAGCCATCCTTTCTCGAAAATTGCTATTCATAAATCTACATTCGCTCTTAATGAAAATGCTGATGTTAAAGCCTCTCCATCTGGCGAGAATGCAGAATGGGTAACATTGAAGTATAGTTCTCCAAACCCGTCCTCTGATGATTGGATTGGAGTATTTTCTCCAGCCAATTTCAGTTCTTCTTCCTGCCCTATGGATAATCCAAGAGTATATCCACCATTGTTGTGTTCTGCACCTATCAAGTTTCTGTATGCCAATTACACAAATCCCAAGTACAAAACTACTGGACGAGGGCTTTTGAAACTTCAGCTGATAAACCAGAGATCCGACTTCTCGTTCGCATTATTTTCTGGTGGTTTAGCGAAACCGAAGGTGGTGGCAATATCAAACCGAGTAACTTTTGCAAATCCTGATGCACCACTTTACCCACGCTTGGCACAAGGAAAAGATTGGAATGAAATGACTGTAACATGGACAAGTGGATACGGAATTGATGAGGCTGAACCTTTGGTTGAGTGGAGCCAAAATGGAAAAGACCTTATGCGATCCCCAGCGGGCACACTGACTTTTGATCGTAACAGCATGTGTGGTGCACCTGCAAGGACAGTGGGATGGCGAGACCCTGGATTTATACACACCAGTTTTCTCAAGGAATTGTGGCCCAACAATGACTCGACATATAAGTTCAGAGCCCCGCCTTATCCTGGTCAAAATTCGTTACAAAGAGTTGTTATTTTTGGTGACATGGGAAAGGATGAAGCTGATGGTTCTAATGAATTCAACGATTTCCAGCATGGCTCTCTCAATACTACTAGAACGCTTATACAAGATTTGAAAAATATTGATATCGTTTTCCACATTGGAGATATATGTTATGCGAACGGATATCTTTCTCAGTGGGATCAGTTTACTGCACAAATTGGGCCAATTGCATCAACAGTGCCTTACATGATTGCTAGTGGTAACCATGAGCGTGACTGGCCAGGGAGTGGATCCTTCTATGACACCATGGATTCAGGGGGAGAATGTGGTGTAGTGGCTCAAAATTTGTTCTATGTCCCTGCTGAGAATCGGGAAAAGTATGTCTCAGACTATGGTATGTTTCGCTTCTGCGTTGCCAACACAGAGCTCGACTGGAGAGAGGGAACAGAACAATACAAGTTCATTGAGCACTGTCTAGCTTCTGTTGATAGGCAAAAGCAGCCATGGCTAATTTTTCTGGCACATCGTGTGTTGGGTTACTCTTCTTGCACATTTTATGCTGAGCAAGGGTCATCTTCAGAACCAATGGGCCGTGAGAGCCTTCAAAGTCTCTGGCAGAAATATAAGGTTGATCTTGCTATATATGGCCATGTGCATAGTTACGAGAGAACATGTCCCATCTACCAGAATATTTGTACCAATGATGAGAAACACTACTATAAGGGCGCCTTGAATGGAACAATTCATGTCGTTGCTGGTGGTGGAGGGGCAAGCCTTTCACCATTTATCACACTCCAAACAAAATGGAGTATTTACAGAGATTATGATTATGGATTTGTCAAGCTTACTGCATTTGACCATTCAAACCTTTTGTTTGAGTACAAGAAGAGTAGTGATGGAAGGGTTTATGACTCATTCAGACTATCAAGGGATTATAGGGACATTTTAGCCTGTGCAGTTGATAGTTGCCCCAGCACGACACTGGCTTCGTAA 1944 43.06 MVSSLMAVSHHPLQLNSNLKEPLCRRQWTGSSTSKVLSKFELRSFSASFFCSSVQISVVMRPLEFLCLGILWILATLQQVKSHGSHPFSKIAIHKSTFALNENADVKASPSGENAEWVTLKYSSPNPSSDDWIGVFSPANFSSSSCPMDNPRVYPPLLCSAPIKFLYANYTNPKYKTTGRGLLKLQLINQRSDFSFALFSGGLAKPKVVAISNRVTFANPDAPLYPRLAQGKDWNEMTVTWTSGYGIDEAEPLVEWSQNGKDLMRSPAGTLTFDRNSMCGAPARTVGWRDPGFIHTSFLKELWPNNDSTYKFRAPPYPGQNSLQRVVIFGDMGKDEADGSNEFNDFQHGSLNTTRTLIQDLKNIDIVFHIGDICYANGYLSQWDQFTAQIGPIASTVPYMIASGNHERDWPGSGSFYDTMDSGGECGVVAQNLFYVPAENREKYVSDYGMFRFCVANTELDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSCTFYAEQGSSSEPMGRESLQSLWQKYKVDLAIYGHVHSYERTCPIYQNICTNDEKHYYKGALNGTIHVVAGGGGASLSPFITLQTKWSIYRDYDYGFVKLTAFDHSNLLFEYKKSSDGRVYDSFRLSRDYRDILACAVDSCPSTTLAS 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 425722 431162 + Cp4.1LG07g00810.1 Cpe07g00088 471895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00088 647 Pfam Iron/zinc purple acid phosphatase-like protein C 563 622 IPR025733 -
Cpe07g00088 647 Gene3D - 319 631 IPR029052 -
Cpe07g00088 647 PANTHER PURPLE ACID PHOSPHATASE 61 646 - -
Cpe07g00088 647 SUPERFAMILY Purple acid phosphatase, N-terminal domain 201 312 IPR008963 GO:0003993|GO:0046872
Cpe07g00088 647 Pfam Fn3-like domain from Purple Acid Phosphatase 110 219 IPR040974 -
Cpe07g00088 647 CDD MPP_PAPs 324 627 IPR041792 -
Cpe07g00088 647 Pfam Calcineurin-like phosphoesterase 325 538 IPR004843 GO:0016787
Cpe07g00088 647 PANTHER PURPLE ACID PHOSPHATASE-RELATED 61 646 - -
Cpe07g00088 647 SUPERFAMILY Metallo-dependent phosphatases 324 629 IPR029052 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00088 Cpe-Chr7:425722 Cpe18g00903 Cpe-Chr18:8097094 0 dispersed
Cpe07g00088 Cpe-Chr7:425722 Cpe02g00767 Cpe-Chr2:4891347 4.81E-21 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00088 K22390 - csv:101220367 1129.39