Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00088 ATGGTCTCTTCACTAATGGCTGTTTCTCATCATCCGCTCCAACTGAATTCGAATTTGAAGGAGCCGCTCTGTCGTCGACAATGGACAGGTTCTAGCACTTCCAAAGTTTTGTCAAAATTTGAACTCCGATCCTTTTCAGCTTCGTTCTTCTGCAGTTCAGTTCAGATATCGGTTGTGATGAGACCCCTGGAATTTCTCTGCCTGGGAATATTATGGATTCTAGCGACACTGCAACAAGTCAAATCACATGGAAGCCATCCTTTCTCGAAAATTGCTATTCATAAATCTACATTCGCTCTTAATGAAAATGCTGATGTTAAAGCCTCTCCATCTGGCGAGAATGCAGAATGGGTAACATTGAAGTATAGTTCTCCAAACCCGTCCTCTGATGATTGGATTGGAGTATTTTCTCCAGCCAATTTCAGTTCTTCTTCCTGCCCTATGGATAATCCAAGAGTATATCCACCATTGTTGTGTTCTGCACCTATCAAGTTTCTGTATGCCAATTACACAAATCCCAAGTACAAAACTACTGGACGAGGGCTTTTGAAACTTCAGCTGATAAACCAGAGATCCGACTTCTCGTTCGCATTATTTTCTGGTGGTTTAGCGAAACCGAAGGTGGTGGCAATATCAAACCGAGTAACTTTTGCAAATCCTGATGCACCACTTTACCCACGCTTGGCACAAGGAAAAGATTGGAATGAAATGACTGTAACATGGACAAGTGGATACGGAATTGATGAGGCTGAACCTTTGGTTGAGTGGAGCCAAAATGGAAAAGACCTTATGCGATCCCCAGCGGGCACACTGACTTTTGATCGTAACAGCATGTGTGGTGCACCTGCAAGGACAGTGGGATGGCGAGACCCTGGATTTATACACACCAGTTTTCTCAAGGAATTGTGGCCCAACAATGACTCGACATATAAGTTCAGAGCCCCGCCTTATCCTGGTCAAAATTCGTTACAAAGAGTTGTTATTTTTGGTGACATGGGAAAGGATGAAGCTGATGGTTCTAATGAATTCAACGATTTCCAGCATGGCTCTCTCAATACTACTAGAACGCTTATACAAGATTTGAAAAATATTGATATCGTTTTCCACATTGGAGATATATGTTATGCGAACGGATATCTTTCTCAGTGGGATCAGTTTACTGCACAAATTGGGCCAATTGCATCAACAGTGCCTTACATGATTGCTAGTGGTAACCATGAGCGTGACTGGCCAGGGAGTGGATCCTTCTATGACACCATGGATTCAGGGGGAGAATGTGGTGTAGTGGCTCAAAATTTGTTCTATGTCCCTGCTGAGAATCGGGAAAAGTATGTCTCAGACTATGGTATGTTTCGCTTCTGCGTTGCCAACACAGAGCTCGACTGGAGAGAGGGAACAGAACAATACAAGTTCATTGAGCACTGTCTAGCTTCTGTTGATAGGCAAAAGCAGCCATGGCTAATTTTTCTGGCACATCGTGTGTTGGGTTACTCTTCTTGCACATTTTATGCTGAGCAAGGGTCATCTTCAGAACCAATGGGCCGTGAGAGCCTTCAAAGTCTCTGGCAGAAATATAAGGTTGATCTTGCTATATATGGCCATGTGCATAGTTACGAGAGAACATGTCCCATCTACCAGAATATTTGTACCAATGATGAGAAACACTACTATAAGGGCGCCTTGAATGGAACAATTCATGTCGTTGCTGGTGGTGGAGGGGCAAGCCTTTCACCATTTATCACACTCCAAACAAAATGGAGTATTTACAGAGATTATGATTATGGATTTGTCAAGCTTACTGCATTTGACCATTCAAACCTTTTGTTTGAGTACAAGAAGAGTAGTGATGGAAGGGTTTATGACTCATTCAGACTATCAAGGGATTATAGGGACATTTTAGCCTGTGCAGTTGATAGTTGCCCCAGCACGACACTGGCTTCGTAA 1944 43.06 MVSSLMAVSHHPLQLNSNLKEPLCRRQWTGSSTSKVLSKFELRSFSASFFCSSVQISVVMRPLEFLCLGILWILATLQQVKSHGSHPFSKIAIHKSTFALNENADVKASPSGENAEWVTLKYSSPNPSSDDWIGVFSPANFSSSSCPMDNPRVYPPLLCSAPIKFLYANYTNPKYKTTGRGLLKLQLINQRSDFSFALFSGGLAKPKVVAISNRVTFANPDAPLYPRLAQGKDWNEMTVTWTSGYGIDEAEPLVEWSQNGKDLMRSPAGTLTFDRNSMCGAPARTVGWRDPGFIHTSFLKELWPNNDSTYKFRAPPYPGQNSLQRVVIFGDMGKDEADGSNEFNDFQHGSLNTTRTLIQDLKNIDIVFHIGDICYANGYLSQWDQFTAQIGPIASTVPYMIASGNHERDWPGSGSFYDTMDSGGECGVVAQNLFYVPAENREKYVSDYGMFRFCVANTELDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSCTFYAEQGSSSEPMGRESLQSLWQKYKVDLAIYGHVHSYERTCPIYQNICTNDEKHYYKGALNGTIHVVAGGGGASLSPFITLQTKWSIYRDYDYGFVKLTAFDHSNLLFEYKKSSDGRVYDSFRLSRDYRDILACAVDSCPSTTLAS 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 425722 431162 + Cp4.1LG07g00810.1 Cpe07g00088 471895

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00088 647 Pfam Iron/zinc purple acid phosphatase-like protein C 563 622 IPR025733 -
Cpe07g00088 647 Gene3D - 319 631 IPR029052 -
Cpe07g00088 647 PANTHER PURPLE ACID PHOSPHATASE 61 646 - -
Cpe07g00088 647 SUPERFAMILY Purple acid phosphatase, N-terminal domain 201 312 IPR008963 GO:0003993|GO:0046872
Cpe07g00088 647 Pfam Fn3-like domain from Purple Acid Phosphatase 110 219 IPR040974 -
Cpe07g00088 647 CDD MPP_PAPs 324 627 IPR041792 -
Cpe07g00088 647 Pfam Calcineurin-like phosphoesterase 325 538 IPR004843 GO:0016787
Cpe07g00088 647 PANTHER PURPLE ACID PHOSPHATASE-RELATED 61 646 - -
Cpe07g00088 647 SUPERFAMILY Metallo-dependent phosphatases 324 629 IPR029052 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00088 K22390 ACP7; acid phosphatase type 7 - csv:101220367 1129.39
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00088 Cpe-Chr7:425722 Cpe18g00903 Cpe-Chr18:8097094 0 dispersed
Cpe07g00088 Cpe-Chr7:425722 Cpe02g00767 Cpe-Chr2:4891347 4.81E-21 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g38 Blo01g00453 . Bda01g02128 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0528 Cone9ag0540 . . . . . . . . . Bpe02g02315 Bma01g00122 . . . . . . . . . Cpe07g00088 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007198 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 1 1 1 1 1 1 1 4 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe07g00088 Cpe_Chr07 FPKM 14.118667 17.653378 27.971739 24.487228 13.347811 13.302782 13.550439 19.018942 17.890671 22.270163