Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00089 ATGCATAAGGATATGAACAATATTGGGGTAAAGAAGAGAGGACATGGGAATCGTTCTTGGATAAAGATTGATCAGGAAGGGAACTCAGAGGTTTTGGAGCTTGAGAAGGCTACTATAATGAGGCATTGTTCTTTACCTTCAAGAGATATGCGACTTTTGGATCCGCTCTTCCTTTGCCCGTCCACAATTCTCGGGAGGGAGAAGGCGATCGTTGTCAGTCTCGAGCAAATTCGGTGTATAATCACAGCTGATGAGGTGATTCTGATGAACTCCTTAGATGGATGTGCTGCTCAGTACAAGGCAGAGCTGTGCAAGCGTCTCCATGCAAGTAAAGATCAATCAGATGATTTGCCCTTTGAATTTAGGGCACTGGAGCTGGCGCTGGAACTTACTTGTTCATTTCTTGACACTCAGATGAAGGGGATGGAAATCGAGATATACCCTCTACTGGATGCTTTAGCGTCTTCGATAAACACGCTTAATCTCGAAAGAGTTCGAAGATTTAAAGGCAACCTTCTGTCCTTGACTCAACAAGTGCAAAAGGTACGTGATGAAGTCGAGCATCTGATGGACGATGATGGGGATATGGCAGAGATGTTTCTGACAGAAAAGAAACAAAGATTGGAGGCGAACATCCGAAGTAACTTGTATCTCGAAACTAGTTTCTTCGGGAAACCAAAATCTGCTCCTGTTTCACCAGTGGGTTCGACCAATGAATCTTTTAAATTACAAAGGGCTTTTAGCAGTATTGTAAACTCGAGCAGCTTGATGAGTTCATCAAATGGTGGTGATAACGTCGAACAATTGGAGATGCTGCTCGAGGCGTACTTCGTGGTTATTGATGACATGCTCAGTAAATTGTTATCGCTCAAAGAATCTATAGATGACACAGAAGATCTGATCAACATTAAACTGGGCAACGTTCAGAACCAGCTGATACAATTCCAGGTGCTTTTCACTGCAGCTACGTTCTTGGCTACGATGTTTGCGGCGTTAACTGCAGTTTTCGGCATGAATTTTTCCGACGATGTCTTCGAGCATCCGACTTCTTTCCAGTGGATAGTTTACTTGACCTTGATTGCCTGTGGCCTTGTGTTTATCTCTTTTCTATTCTATTTTAGGTACAAGAAAATCTTCCCATTGTAA 1146 42.93 MHKDMNNIGVKKRGHGNRSWIKIDQEGNSEVLELEKATIMRHCSLPSRDMRLLDPLFLCPSTILGREKAIVVSLEQIRCIITADEVILMNSLDGCAAQYKAELCKRLHASKDQSDDLPFEFRALELALELTCSFLDTQMKGMEIEIYPLLDALASSINTLNLERVRRFKGNLLSLTQQVQKVRDEVEHLMDDDGDMAEMFLTEKKQRLEANIRSNLYLETSFFGKPKSAPVSPVGSTNESFKLQRAFSSIVNSSSLMSSSNGGDNVEQLEMLLEAYFVVIDDMLSKLLSLKESIDDTEDLINIKLGNVQNQLIQFQVLFTAATFLATMFAALTAVFGMNFSDDVFEHPTSFQWIVYLTLIACGLVFISFLFYFRYKKIFPL 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 430584 436233 - Cp4.1LG07g00860.1 Cpe07g00089 471896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00089 381 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 381 IPR039204 -
Cpe07g00089 381 Coils Coil 165 192 - -
Cpe07g00089 381 PANTHER MAGNESIUM TRANSPORTER MRS2-5 6 381 - -
Cpe07g00089 381 CDD Mrs2_Mfm1p-like 20 378 IPR039204 -
Cpe07g00089 381 Gene3D - 5 91 - -
Cpe07g00089 381 Gene3D Magnesium transport protein CorA, transmembrane region 94 312 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00907 Cpe-Chr3:5828686 Cpe07g00089 Cpe-Chr7:430584 3.25E-147 dispersed
Cpe07g00089 Cpe-Chr7:430584 Cpe12g00161 Cpe-Chr12:1043975 2.24E-90 dispersed
Cpe07g00089 Cpe-Chr7:430584 Cpe02g01612 Cpe-Chr2:13498264 3.75E-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00089 K16075 - csv:101220835 628.246