Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00090 ATGGGCCGTGGAGTTAGCAGTGGTGGTGGGCAGAGCTCATTGGGGTATCTGTTTGGAAGTGGAGAATCTCCCAATGCAGGTGCCCCCAAAGGTGGCCAAGCACCAGCTCCAGCACCAGCACCAGCACCAGCACCAGCACCACGTTCTAATGAAGCAAAGCCTGTATCCAAACCAGCAGCTTCCAAACCTGCTGCTACTGCTTCACCACCTACAGATTCTGGCAAGCAGATTCCAGCTGGTATTCATAGTAGCTCCTCAAACAACTATTTGAGGGCTGATGGTCAGAACACTGGCAATTTCATAACGGATCGGCCTTCAACCAAGGTCCACGCAGCTCCTGGCGGTGGATCTTCTCTGGATTATCTGTTTGGTGGTGCTGGTGGAAAATGA 390 52.56 MGRGVSSGGGQSSLGYLFGSGESPNAGAPKGGQAPAPAPAPAPAPAPRSNEAKPVSKPAASKPAATASPPTDSGKQIPAGIHSSSSNNYLRADGQNTGNFITDRPSTKVHAAPGGGSSLDYLFGGAGGK 129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 436648 439777 - Cp4.1LG07g00840.1 Cpe07g00090 471897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00090 129 MobiDBLite consensus disorder prediction 1 19 - -
Cpe07g00090 129 PANTHER PROTEIN SPIRAL1-LIKE 2 1 127 - -
Cpe07g00090 129 MobiDBLite consensus disorder prediction 1 129 - -
Cpe07g00090 129 PANTHER SPR1 1 127 IPR039613 GO:0043622
Cpe07g00090 129 MobiDBLite consensus disorder prediction 34 48 - -
Cpe07g00090 129 MobiDBLite consensus disorder prediction 66 104 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00708 Cpe-Chr1:4097133 Cpe07g00090 Cpe-Chr7:436648 6.78E-15 dispersed
Cpe01g02430 Cpe-Chr1:20175906 Cpe07g00090 Cpe-Chr7:436648 4.49E-26 dispersed
Cpe11g00392 Cpe-Chr11:2162313 Cpe07g00090 Cpe-Chr7:436648 5.55E-57 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00090 K18635 - csv:101221309 142.124