Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00092 ATGGTAGGTGTACGTATCCAGCTAAATAAATGGCAGCAAGCAGCTGTTGCACTTGGTTCAGCAGTAGGCGCCTTGCTCGATCCACGCCGAGCAGATCTAATAGCAGCTCTTGGGGAGACAACCGGAAAGCCAGCATTTGAAAGAGTCCTCGAGAGGATGAAAAGAAGTGCTGAAGGCAGAGCAGTGTTGTTGGAGCGACCACGTGTTTTATCATCAGAAGTTGGGCATGCGTGGGACCTTCCATCCAACACATTTGGCGCTGCATATGCCAATTTTATGGGTTCCAGGAACTTTTCTCCAGATGACCGGCCTCCTGTTCGATTCATGGATACTGACGAACTGGAATATGTTGCCATGCGAGCTCGCGAGATTCATGACTTTTGGCACACGCTTTTTGGTCTTCCCACCAACTTGATTGGTGAGTCGGCATTGAAGGTTATTGAATTTGAGCAAATGCACCTCCCAATGTGCATGCTGTCCGTTTTGGGAGGCACAGCAAGGTTCAATGATAAACAGAGAAATTTGTTCTTCCAGCACTACTTCCCTTGGGCCATCCGTGCTGGCATGCGGTGCAATGATCTCATGTGCGTATATTATGAGCGACACTTCCACGAGGATTTGGATGACGTGCGGGCGAAATGGGGAATAATTCCTGCACCTCCATCTCCAAAAGCAAAGTATGGGAATGCGACCCCAACCAGCTCATCACCGTCCATCTCCATGCTGACTTCGTTCATGGATGCCACGGAATATTCTCCTGATAAGGTGGACAGGTGTTTGTTTGATGCTTGTTTGGGGGAGGGATTTTCTCTCTTAGAACATTGTTTGGCTACACATCTATGTGCAGTGTGTAGCCGTCTCCTTGTCTTCTACTTGGCGCCAAACCAGACTCAACCAACCATGTCATCACTAAACTTCCAAACCTTTGTTCTCCATTTCCCTTCTTCCATTTCCCAAAGCTTCCCAGCCCTTCTCTCCGCGCTGCTTCTTCTCTCCATTTTCGCCTTCTTCCTTCACCCCGGCGGCCTCGCTTGGGCCCTTTCCAAGTCCAAAACCGCCGCCTCTGCCGCCATCCCCGGCCCCTCCGGCTTCCCATTCATCGGTCTCCTCCATATCTTCACTCTCTCAAAAACCCCTCACAAAGCCCTCTCTGCACTTTCCAATAAATTCAAAGCACACCCTTTAATGGCCTTCTCTGTTGGCCTAACCAAATTTGTAATTTCAAGCCACCCGGATTTTGCCAAGGAAATTCTTAATAGCGCTTCCTTTGCTGATAGGCCTGTGAAGGAATCCGCTTATGAACTTCTTTTCCACAGAGCAATGGGGTTTGCTCCTTATGGTGAGTATTGGAGGAATTTGAGAAGGATTTCAGCTACTTACATGTTTAGTCCTAAGAGAATCAGTGCATTTGAAGGGTTTAGAAGGGAAGTTGGAGGGAAAATGATAAGGGAAGTTGAGAATTCCATGGCTTTGAATGGGGAAGTTAGAGTTAAGGAGATTCTTCATTTTGGGTCTTTGAATAATGTTATGATGACTGTTTTTGGTAAGTGTTATGAGTTTAGTGCAATGGGGAATGATGGGGTTATGCTTGAGGAACTGGTGAGTGAAGGGTATGAATTGCTTGGGATTTTCAATTGGAGTGATCATTTTCCCTTTCTGGGTTGGCTGGATTTACAAGGTGTGAGGAAGAGATGTAGGTGTTTGGCTTCTAGAGTGAATGTTTTTGTGGGAAAAATCATTGAGGAACATAGAATGAGGAGGAAAGTTAAGCCACATCACGAACACGAAGAACAAGAACAAGAACATAATAGAGACTTTGTTGATGTCCTACTTGATTTGGAGAAAGATGACAAGCTCTCAGATTCCGACATGATTGCTGTTCTTTGGGAAATGATTTTTCGAGGAACAGACACAGTGGCAATACTGTTGGAATGGATCATAGCTAGAATGGTTCTACACCCAGAAATCCAAACCAAAGCTCAAAACGAAATCGATTCAGTAATTGGCAAAAGATCCAAACCCATTTCAGATTCTGATATCCCAAATCTTCCATTTCTTCAATCCATTGTCAAAGAGTGTTTAAGACTGCACCCACCAGGGCCACTTCTATCATGGGCCAGGCTCGCAGTCAACGACGTGGACGTCGGCGGGAGGCTGATTCCTGCCGGGACGACGGCGATGGTGAACATGTGGGCAATAACACACAATGAAAAGGTTTGGTTGGAGGCTGAGAAGTTCGAGCCAAATAGGTTCATGGAAGAGGAAGTGAGTGTTATGGGAAGTGATTTGAGATTGGCTCCATTTGGTGCAGGGAGAAGAGTGTGCCCTGGAAAAGCCATGGGATTGGCCACTGTTCATCTCTGGTTGGCTCAGTTGCTTCAAGCTTTCAAATGGGTTCCTTCTGAAAAGGGCATTAATGGCGTTGACTTGTCAGAATGTCTCAAACTCTCTTTGGAAATGCAAACTCCATTGATTTGCAGAGCTATCCCTAGGGTTTGCTAA 2502 46.28 MVGVRIQLNKWQQAAVALGSAVGALLDPRRADLIAALGETTGKPAFERVLERMKRSAEGRAVLLERPRVLSSEVGHAWDLPSNTFGAAYANFMGSRNFSPDDRPPVRFMDTDELEYVAMRAREIHDFWHTLFGLPTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNDKQRNLFFQHYFPWAIRAGMRCNDLMCVYYERHFHEDLDDVRAKWGIIPAPPSPKAKYGNATPTSSSPSISMLTSFMDATEYSPDKVDRCLFDACLGEGFSLLEHCLATHLCAVCSRLLVFYLAPNQTQPTMSSLNFQTFVLHFPSSISQSFPALLSALLLLSIFAFFLHPGGLAWALSKSKTAASAAIPGPSGFPFIGLLHIFTLSKTPHKALSALSNKFKAHPLMAFSVGLTKFVISSHPDFAKEILNSASFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATYMFSPKRISAFEGFRREVGGKMIREVENSMALNGEVRVKEILHFGSLNNVMMTVFGKCYEFSAMGNDGVMLEELVSEGYELLGIFNWSDHFPFLGWLDLQGVRKRCRCLASRVNVFVGKIIEEHRMRRKVKPHHEHEEQEQEHNRDFVDVLLDLEKDDKLSDSDMIAVLWEMIFRGTDTVAILLEWIIARMVLHPEIQTKAQNEIDSVIGKRSKPISDSDIPNLPFLQSIVKECLRLHPPGPLLSWARLAVNDVDVGGRLIPAGTTAMVNMWAITHNEKVWLEAEKFEPNRFMEEEVSVMGSDLRLAPFGAGRRVCPGKAMGLATVHLWLAQLLQAFKWVPSEKGINGVDLSECLKLSLEMQTPLICRAIPRVC 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 446237 452753 - Cp4.1LG07g00900.1 Cpe07g00092 471899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00092 833 Hamap Ubiquinone biosynthesis protein <gene_name>, mitochondrial [COQ4]. 1 219 IPR027540 GO:0005743|GO:0006744
Cpe07g00092 833 Gene3D Cytochrome P450 345 825 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 PRINTS E-class P450 group I signature 623 640 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 PRINTS E-class P450 group I signature 729 753 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 PRINTS E-class P450 group I signature 765 775 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 PRINTS E-class P450 group I signature 687 705 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 PRINTS E-class P450 group I signature 643 669 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 PRINTS E-class P450 group I signature 775 798 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 SUPERFAMILY Cytochrome P450 358 831 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 PRINTS P450 superfamily signature 688 699 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 PRINTS P450 superfamily signature 634 651 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 PRINTS P450 superfamily signature 766 775 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 Pfam Cytochrome P450 359 803 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe07g00092 833 PANTHER CYTOCHROME P450 78A7-RELATED 309 831 - -
Cpe07g00092 833 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 768 777 IPR017972 GO:0005506|GO:0016705
Cpe07g00092 833 Pfam Coenzyme Q (ubiquinone) biosynthesis protein Coq4 5 220 IPR007715 GO:0006744
Cpe07g00092 833 PANTHER CYTOCHROME P450 78A5 309 831 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00092 Cpe-Chr7:446237 Cpe12g00430 Cpe-Chr12:3286711 1.51E-176 dispersed
Cpe03g01008 Cpe-Chr3:8250512 Cpe07g00092 Cpe-Chr7:446237 5.40E-16 transposed
Cpe09g00587 Cpe-Chr9:4078957 Cpe07g00092 Cpe-Chr7:446237 0 transposed
Cpe11g00396 Cpe-Chr11:2182571 Cpe07g00092 Cpe-Chr7:446237 2.08E-179 transposed
Cpe11g00397 Cpe-Chr11:2189777 Cpe07g00092 Cpe-Chr7:446237 3.65E-150 transposed
Cpe20g00084 Cpe-Chr20:447622 Cpe07g00092 Cpe-Chr7:446237 0 transposed
Cpe11g00395 Cpe-Chr11:2181854 Cpe07g00092 Cpe-Chr7:446237 5.56E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00092 K20619 - csv:101221468 843.188