Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe07g00095 | ATGGGAGTGGGGAAGAAGTGTTGTGTGTTTTCTTGTACTTTTTTCAAGTTGCAGGTTTTGGAGTATCGTGTCGGGAGGGTTGTTATTGACAATGAAGCCTGTAAGGATGCTACTGTTATAAGGGTAGATAGCGCCAATAAACATGGGATTCTTCTTGAAGTCGTTCAAGTTCTTACTGATCTTAATCTCATCGTCACCAAAGCCTATATTTCTTGTGATGGTTGTTGGTTCATGGATGTTTTTAATGTCACTGATCAAGATGGAAACAAAGTTACAGATGAAGGGGTTTTAGACTATATCAAAAGGTCGCTTGAGTCGGATTCTTGTTTTGCATCTTCCATGAGATCTGTGGGTGTAAAACCATCGGTTGATTACACAGCAATTGAGCTTATTGGAAATGATAGACAAGGATTACTTTCTGAACTCAGCGCTGTCCTCACTCACCTCAAATGCAACGTTGTGCACGCCGAGGTGTGGACTCACAACACACGGGCGGCCGCCGTGATGCATGTCACCGACGACGAAACTGGTTCTGCAATTACTGATCTTGAGAGGCTATCTAGGATCAAGGGATTACTCTGTAATGTACTAAGGGGAAGCAACAATAGGACCAATGGAGCTAAGACGGTCGTGTCTCAAGGAGTCACTCACATTGACAGAAGGCTTCATCAGATGATGTGTGCTGATAGGGATTATGAACTTCTTGGTGAAGATTTAATGGACGAGAAGCAAAGGCCTAATGTCAAGGTTGTTAATTGGTGTGACATAGACTATTCTGTCATTACAATTCGGAGCAAAGATCGCCCGAAACTTCTTTTCGACACAATTTGCACGTTGACAGATATGCAATATGTGGTCTTCCATGCCAATGTAGTTGCTGAAGGGACAGAAGCCTATCAGGAATATTACATTAGACATATAGATGGATCTCCTGTTAAATCTGATGCAGAGAAACAAAGGGTAATTCAATGTCTTGAAGCTGCTATAAGGAGAAGAGTGTCTGAGGGCTTGAAGCTTGAGTTATGCACAACAGATAGAGTAGGCCTTCTCTCAGATGTCACCCGCATCTTCCGAGAGAACAGCCTGACTGTCACAAGAGCAGAGGTATCAACTAAAGGCGGTAAGGCGATTAATACGTTCTACGTTCGTGATGCGTCGGGGTATCCAGTCGATTCGAAGACGATAGATTCAATTCGAGATTTGATCGGGCAAACAATACTGAAAGTGAAAGGCAGTCCTAAAGAACAAAAACAAGGTTCTTCTCAGGATTCACCAACTAGATTCTTATTTGGTGGTCTTTTTAGATCTAGATCTTTTGTAAATTTTGGGTTAATAAGGTCATAA | 1344 | 42.19 | MGVGKKCCVFSCTFFKLQVLEYRVGRVVIDNEACKDATVIRVDSANKHGILLEVVQVLTDLNLIVTKAYISCDGCWFMDVFNVTDQDGNKVTDEGVLDYIKRSLESDSCFASSMRSVGVKPSVDYTAIELIGNDRQGLLSELSAVLTHLKCNVVHAEVWTHNTRAAAVMHVTDDETGSAITDLERLSRIKGLLCNVLRGSNNRTNGAKTVVSQGVTHIDRRLHQMMCADRDYELLGEDLMDEKQRPNVKVVNWCDIDYSVITIRSKDRPKLLFDTICTLTDMQYVVFHANVVAEGTEAYQEYYIRHIDGSPVKSDAEKQRVIQCLEAAIRRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVSTKGGKAINTFYVRDASGYPVDSKTIDSIRDLIGQTILKVKGSPKEQKQGSSQDSPTRFLFGGLFRSRSFVNFGLIRS | 447 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 481898 | 484626 | - | Cp4.1LG07g00910.1 | Cpe07g00095 | 471902 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe07g00095 | 447 | CDD | ACT_ACR_3 | 258 | 332 | - | - | |
| Cpe07g00095 | 447 | ProSiteProfiles | ACT domain profile. | 338 | 414 | IPR002912 | - | |
| Cpe07g00095 | 447 | Pfam | ACT domain | 38 | 89 | IPR002912 | - | |
| Cpe07g00095 | 447 | Pfam | ACT domain | 344 | 399 | IPR002912 | - | |
| Cpe07g00095 | 447 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED | 25 | 446 | IPR040217 | - | |
| Cpe07g00095 | 447 | CDD | ACT_ACR_2 | 126 | 199 | - | - | |
| Cpe07g00095 | 447 | ProSiteProfiles | ACT domain profile. | 127 | 207 | IPR002912 | - | |
| Cpe07g00095 | 447 | PANTHER | BNAC06G29950D PROTEIN | 25 | 446 | - | - | |
| Cpe07g00095 | 447 | SUPERFAMILY | ACT-like | 34 | 103 | IPR045865 | - | |
| Cpe07g00095 | 447 | Pfam | ACT domain | 128 | 191 | - | - | |
| Cpe07g00095 | 447 | Gene3D | - | 125 | 198 | - | - | |
| Cpe07g00095 | 447 | SUPERFAMILY | ACT-like | 124 | 184 | IPR045865 | - | |
| Cpe07g00095 | 447 | CDD | ACT_ACR_4 | 336 | 407 | - | - | |
| Cpe07g00095 | 447 | SUPERFAMILY | ACT-like | 334 | 403 | IPR045865 | - | |
| Cpe07g00095 | 447 | ProSiteProfiles | ACT domain profile. | 39 | 119 | IPR002912 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe01g01517 | Cpe07g00095 | CCT | |
| Cpe07g00095 | Cpe09g00233 | CCT | |
| Cpe07g00095 | Cpe09g00233 | ECH | |
| Cpe01g01517 | Cpe07g00095 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g00982 | Cpe-Chr1:5827855 | Cpe07g00095 | Cpe-Chr7:481898 | 1.89E-170 | dispersed | |
| Cpe07g00095 | Cpe-Chr7:481898 | Cpe09g00233 | Cpe-Chr9:1345306 | 0 | dispersed | |
| Cpe07g00095 | Cpe-Chr7:481898 | Cpe13g01131 | Cpe-Chr13:9014946 | 9.97E-175 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe07g00095 | - | - | csv:101218703 | 783.482 |