Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g00099 | ATGAGAACGGCGAAAAGCGTTCAGGAAGACGAAGAGTACGAGGAGGACGAGCTGGTTGCTAAAAGAGAGGGGCCTGCTTCTACTTACAACGCAAACAGTAGCATCGGAAACAGCAAAGATGGGAAGCACAATGATAAGGCTAATGCCATAAGGTCGAAGCACTCAGTCACGGAACAGCGCAGAAGAAGCAAGATTAATGAGAGATTCCAGATTTTGAGAGATCTTATACCTCACAGCGACCAAAAGAGAGATACCGTGTCGTTCTTATTGGAGGTGATTGAGTATGTACAGTATTTACAGGAAAAGGTGCAGAAATACGAGGGTTCATATCAGAATTGGAGTGGGGAACCTACTAAGTTGATACCATGGAGAAATAGTCATTGGCGTATGCCGACTTTTGTTGGCCATCCCGAGTCTGTAAAAAATGGTTCTGCTTCAGGACCAATGTATTCAGGGAAGTTTGATGACAACAACATTTCAATTTCACCAGCCATGCTTGCGAGCTCACAGAATCCTCTCGAGTCCCACACAGGCAGAGATATTCTACAGGATGCTGACATCACAAATAAAGTTCCACTTCCCATGTCTCTGGAAGGAAATACTCATGCTTCTATCCGTAGTGATGGTGTTCATGATCAATCTCTCCACGTTCCAATTTCTGATGCACAGACAACAGAGTGTCCCATCACCAACAATGCATCAAGCCAACCGGAGGAGATGAGCATTCAAGGAGGGACAATAAGCGTTTCGAGTCTTTATTCAGAAGGGTTATTGAACAGCTTGACTCAAGCTCTGCAGAATACTGGACTGGATTTGTCACAGGCTAGTATCTCCGTTCAGATTGATCTGGGCAAGCGAGCGAATAAGAGAACGCCATGCGGAACCCCTATTTATAAGGAAACTGGGAATCCTCCCTCCGGCCACCCATCAATGGCACATGAAGGGGACCTGGACAGTGAAGACGACTCAGATCAAGTCAAAAAGCGGCGTAGGACATGA | 999 | 45.95 | MRTAKSVQEDEEYEEDELVAKREGPASTYNANSSIGNSKDGKHNDKANAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTVSFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNSHWRMPTFVGHPESVKNGSASGPMYSGKFDDNNISISPAMLASSQNPLESHTGRDILQDADITNKVPLPMSLEGNTHASIRSDGVHDQSLHVPISDAQTTECPITNNASSQPEEMSIQGGTISVSSLYSEGLLNSLTQALQNTGLDLSQASISVQIDLGKRANKRTPCGTPIYKETGNPPSGHPSMAHEGDLDSEDDSDQVKKRRRT | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 507789 | 519716 | - | Cp4.1LG07g01070.1 | Cpe07g00099 | 471906 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g00099 | 332 | MobiDBLite | consensus disorder prediction | 39 | 62 | - | - | |
Cpe07g00099 | 332 | CDD | bHLH_AtBIM_like | 48 | 124 | - | - | |
Cpe07g00099 | 332 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Cpe07g00099 | 332 | PANTHER | TRANSCRIPTION FACTOR BIM2 | 1 | 332 | - | - | |
Cpe07g00099 | 332 | Pfam | Helix-loop-helix DNA-binding domain | 51 | 100 | IPR011598 | GO:0046983 | |
Cpe07g00099 | 332 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 49 | 99 | IPR011598 | GO:0046983 | |
Cpe07g00099 | 332 | PANTHER | BES1-INTERACTING MYC-LIKE PROTEIN | 1 | 332 | IPR044295 | GO:0003700|GO:0006351|GO:0046983 | |
Cpe07g00099 | 332 | MobiDBLite | consensus disorder prediction | 313 | 332 | - | - | |
Cpe07g00099 | 332 | Gene3D | - | 47 | 119 | IPR036638 | GO:0046983 | |
Cpe07g00099 | 332 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 47 | 119 | IPR036638 | GO:0046983 | |
Cpe07g00099 | 332 | MobiDBLite | consensus disorder prediction | 288 | 332 | - | - | |
Cpe07g00099 | 332 | SMART | finulus | 55 | 105 | IPR011598 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01392 | Cpe-Chr2:12184151 | Cpe07g00099 | Cpe-Chr7:507789 | 3.82E-62 | dispersed | |
Cpe07g00099 | Cpe-Chr7:507789 | Cpe18g00723 | Cpe-Chr18:7098155 | 3.76E-68 | dispersed | |
Cpe11g00403 | Cpe-Chr11:2225316 | Cpe07g00099 | Cpe-Chr7:507789 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49706 | PF00010 | HLH | 3.20E-13 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g00099 | - | - | mcha:111004954 | 561.992 |