Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00119 ATGCATCTTGAGTTGCCTGGTGGTCATAGTAACAGCCCGCGGGTGAATATTGGTGCCTCAAACCGTGACGATGCCTTCTACAGGTATAAGATGCCTAGGATGGTTACTAAAATTGAAGGTAGAGGTAATGGCATTAAGACCAATGTGGTTAACATGGTGGAAATTGCCAAAGCCTTGGGCAGGCCTGCTTCTTACACTACCAAGTACTTTGGATGTGAGCTTGGTGCACAATCCAAATTCGATGAGAAAACTGGGACTTCTCTTGTAAATGGTGCACACGATACAGCCAAGCTGGCTGGTCTTCTCGAGAACTTTATCAAGAAGTATGTTCAATGCTACGGATGTGGTAACCCCGAAACTGAGATTATCATCACGAAGACGCAGATGATCACTATGAAATGTGCTGCCTGTGGATTTATATCTGATGTTGACATGAGGGATAAAATCACAACATTTATTCTCAAGAATCCTCCTGAACAGAAGAAGGGATCAAAAGACAAGAAAGCTATGAGGCGGGCTGAGAAGGAAAGACTTAAGGAGGGCGAGGCTGCTGATGAGGAGCAGAAGAAGCTAAAGAAGGATTCGGTGAAGAAGAAAAGCACGAGTGGTAATTCAAAGGAAACTGTTACTAAATTGAGTGCAGTCACTGCTGATATGGTCATGCTGTCTACCGAAGAAACTACGTCGTCCAAAAAGCCCTCTGAACATGAGAAGTCTTCGATCAACGGAAACAAGAACGGAAATGGAGTGTCTACCCATGTTGCTCTTGTCAACGAGATCAAAGATTATTTGAAGAAAGGTTCCTCCGCTGCCAACCTCAAATCATTTTTGGGATCACTTTCTGGAACTCCCCAGGAGATTGTTAATGCCTTAGTTGAGGCTCTGTTTGATGGCGTTGGAAAAGGCTTCTCAAAGGAGGTGATGAAGAAGAAGAACTTCTTGGCTGCAGCTGTTGCTCTGGAGGGATCACAGATAGCTCTATTGCGTGCCATTGAATCTTTCTGTCTCAACACGAGTTCGGAGGCTGCTAAGGAGGTTGCTCTGGTTCTGAAATCGCTATACGACAGCAACCTGATCGAGGAGGAATTTGTATTAGAGTGGTACCAGAAGGGCGTGGTTGGCGCTAACAAAAGTTCTCCAATCTGGAACCATGTAAAGCCGTTCATCGAATGGCTCCAGAACGCCGAGTCCGAGACCGAAGAAGAGTAA 1209 45.33 MHLELPGGHSNSPRVNIGASNRDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCELGAQSKFDEKTGTSLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKCAACGFISDVDMRDKITTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEEQKKLKKDSVKKKSTSGNSKETVTKLSAVTADMVMLSTEETTSSKKPSEHEKSSINGNKNGNGVSTHVALVNEIKDYLKKGSSAANLKSFLGSLSGTPQEIVNALVEALFDGVGKGFSKEVMKKKNFLAAAVALEGSQIALLRAIESFCLNTSSEAAKEVALVLKSLYDSNLIEEEFVLEWYQKGVVGANKSSPIWNHVKPFIEWLQNAESETEEE 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 668781 671351 - Cp4.1LG07g01200.1 Cpe07g00119 471926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00119 402 ProSiteProfiles W2 domain profile. 246 402 IPR003307 GO:0005515
Cpe07g00119 402 Gene3D - 7 115 - -
Cpe07g00119 402 Coils Coil 170 190 - -
Cpe07g00119 402 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 16 212 - -
Cpe07g00119 402 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 211 402 IPR045196 GO:0003743|GO:0006413
Cpe07g00119 402 CDD W2_eIF5 256 400 - -
Cpe07g00119 402 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 211 402 - -
Cpe07g00119 402 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 16 212 IPR045196 GO:0003743|GO:0006413
Cpe07g00119 402 SMART eIF2Bneu4 26 140 IPR002735 GO:0003743|GO:0006413
Cpe07g00119 402 SMART 542_3 311 398 IPR003307 GO:0005515
Cpe07g00119 402 Gene3D - 248 393 - -
Cpe07g00119 402 MobiDBLite consensus disorder prediction 224 248 - -
Cpe07g00119 402 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 20 112 IPR016189 GO:0003743|GO:0006413
Cpe07g00119 402 Pfam Domain found in IF2B/IF5 22 138 IPR002735 GO:0003743|GO:0006413
Cpe07g00119 402 Gene3D - 116 156 - -
Cpe07g00119 402 SUPERFAMILY ARM repeat 257 396 IPR016024 -
Cpe07g00119 402 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 109 144 IPR016190 GO:0003743|GO:0006413
Cpe07g00119 402 MobiDBLite consensus disorder prediction 154 210 - -
Cpe07g00119 402 MobiDBLite consensus disorder prediction 159 201 - -
Cpe07g00119 402 Pfam eIF4-gamma/eIF5/eIF2-epsilon 324 402 IPR003307 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00422 Cpe-Chr11:2379859 Cpe07g00119 Cpe-Chr7:668781 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00119 K03262 - egr:104450459 548.51