Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g00124 | ATGCCTGCTTTGATGGATTTCTATGGTTGCAGAGATCTTCAGTCGTATCCAGTTGGTGGTGAATTAATGGAAGCGCTTGAACCTTTTATGAAAGCTGCTTCCTCTTCTTCTTCTTCTTTCCTTCCTTCCTTTTCTCCTTCTTCTTCATCTTTCGTTCCTGATTTCTCCTCTTCTTTCTCTTCAATCCAAACGGAGTCCACTTCTTATCCTTCCGATTGCTCGCCGCCGGTGGCCTATTCATATTCCGACGGGTTTTCGGCTAACAACCTTCACGGTTTGGAGCAATCGGCTTCAATCGGACTCAACTACTTGACTCCCTTTCAGATCCAACAGATCCAATCTCAATTCGGTCTTCAGACTCAGATCCAGCCGGTTTGGGGACATGTTAACAACCAGCAAGAGCTAACGAAAAACCAGATGAACGGCGTGAATTTGCTTGGCCCGAAGGCGATTCCGATGAAACATGCGGGATCTCCACCGAAATCGACGAAGCTTTATCGAGGCGTGAGGCAAAGGCATTGGGGAAAATGGGTGGCTGAGATCCGTCTACCGAGGAACCGTACTCGGCTATGGCTAGGCACCTTCGACACCGCTGAAGAAGCCGCTTTAGCCTATGACAAAGCCGCCTACAAGCTCCGAGGCGATTTCGCCAGGCTTAATTTCCCTCAGCTGAAGCACCACGGCTCCTCCGTCGGCGGCGATTTCGGCGAGTACAAGCCGCTCCACTCCGCGGTCGATGCTAAGCTCGATGCCATATGCCAAACCTTGGCTGAGTCGCAAAAACAGGGGAAATCGAACCGATCTGCCTCCTCGAGGAAGTCGAAATCATCATCGATTTCTTCCACGGTCGGATCGGAGTCTCAGGCACCGACGGTGATCGATTCTGACGACGATCAGAAGGCTAGCGATGTCAGGTCGAGTGGATCGGAGATCTGTTGCAAGGCGGAGAACTCCTCGTCGCCGGTTTCAGCCGAGAGCGACGAGTCAGCAGGATCTTCGCCTTTATCAGATCTGACGTTCCCCGATCCGACAGATTCGCCATGGGAACAGCCGTCAGAAAGCTCTATGTTGCAGAAATATCCGTCTGAAATCGATTGGGCTTCGATTTTCACTTCATGA | 1119 | 51.3 | MPALMDFYGCRDLQSYPVGGELMEALEPFMKAASSSSSSFLPSFSPSSSSFVPDFSSSFSSIQTESTSYPSDCSPPVAYSYSDGFSANNLHGLEQSASIGLNYLTPFQIQQIQSQFGLQTQIQPVWGHVNNQQELTKNQMNGVNLLGPKAIPMKHAGSPPKSTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPQLKHHGSSVGGDFGEYKPLHSAVDAKLDAICQTLAESQKQGKSNRSASSRKSKSSSISSTVGSESQAPTVIDSDDDQKASDVRSSGSEICCKAENSSSPVSAESDESAGSSPLSDLTFPDPTDSPWEQPSESSMLQKYPSEIDWASIFTS | 372 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 705295 | 706413 | + | Cp4.1LG07g01250.1 | Cpe07g00124 | 471931 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g00124 | 372 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 4 | 369 | - | - | |
Cpe07g00124 | 372 | Gene3D | AP2/ERF domain | 165 | 223 | IPR036955 | GO:0003700|GO:0006355 | |
Cpe07g00124 | 372 | ProSiteProfiles | AP2/ERF domain profile. | 165 | 222 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe07g00124 | 372 | SMART | rav1_2 | 165 | 228 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe07g00124 | 372 | CDD | AP2 | 164 | 222 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe07g00124 | 372 | MobiDBLite | consensus disorder prediction | 311 | 360 | - | - | |
Cpe07g00124 | 372 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 | 4 | 369 | - | - | |
Cpe07g00124 | 372 | MobiDBLite | consensus disorder prediction | 258 | 295 | - | - | |
Cpe07g00124 | 372 | SUPERFAMILY | DNA-binding domain | 165 | 223 | IPR016177 | GO:0003677 | |
Cpe07g00124 | 372 | MobiDBLite | consensus disorder prediction | 258 | 360 | - | - | |
Cpe07g00124 | 372 | Pfam | AP2 domain | 166 | 214 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe07g00124 | 372 | PRINTS | Ethylene responsive element binding protein signature | 166 | 177 | IPR001471 | GO:0003700|GO:0006355 | |
Cpe07g00124 | 372 | PRINTS | Ethylene responsive element binding protein signature | 188 | 204 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00530 | Cpe-Chr2:3145427 | Cpe07g00124 | Cpe-Chr7:705295 | 5.07E-16 | dispersed | |
Cpe04g01002 | Cpe-Chr4:9005128 | Cpe07g00124 | Cpe-Chr7:705295 | 8.07E-20 | dispersed | |
Cpe07g00124 | Cpe-Chr7:705295 | Cpe08g01382 | Cpe-Chr8:9925491 | 5.96E-24 | dispersed | |
Cpe18g00295 | Cpe-Chr18:4493873 | Cpe07g00124 | Cpe-Chr7:705295 | 4.47E-21 | dispersed | |
Cpe10g00568 | Cpe-Chr10:3330052 | Cpe07g00124 | Cpe-Chr7:705295 | 2.71E-08 | wgd | |
Cpe11g00428 | Cpe-Chr11:2423216 | Cpe07g00124 | Cpe-Chr7:705295 | 1.07E-41 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49711 | PF00847 | AP2 | 5.00E-15 | CL0081 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g00124 | K09286 | - | csv:101222833 | 517.694 |