Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00142 ATGGCTACCGCCCCCTCTCTTCGCGAGGAGAATGTTTACATGGCCAAGCTTGCTGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCCGCTTCTATTGACAAGGAGGAGCTCACCGTCGAGGAGAGAAACCTCCTCTCCGTCGCCTACAAGAACGTCATCGGCGCTCGTAGGGCCTCTTGGCGTATTATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGAGGTAATGATCACCATGTCTCTGTGATCCGTGACTACAGATCCAAAATCGAGAGCGAACTCTCTAATATCTGCGATGGAATTCTCAAACTCCTTGATTCCAGACTCATTCCTTCCGCGGCCTCCGGAGATTCCAAGGTATTTTACCTTAAAATGAAAGGCGATTACCATAGATACCTGGCTGAATTCAAAACCGGTGCCGAACGGAAGGAAGCTGCCGAAAGTACCCTCACTGCTTACAAAGCCGCTCAGGATATTGCAAATGCCGAGTTGCCTCCCACACATCCGATCCGACTTGGATTGGCCCTCAACTTCTCTGTATTCTACTATGAAATTTTGAATTCTCCTGATCGTGCCTGCAGTCTTGCAAAACAGGCGTTTGATGAAGCCATCGCTGAGTTGGATACCCTTGGCGAGGAATCCTACAAGGATAGTACTTTGATTATGCAACTTCTCCGCGATAACCTCACTCTCTGGACCTCGGACATGCAGGACGAGGGTGCGGATGAGATCAAAGAAGCTCCCCCCAAGCGCGAGGAAGAAAAGCAGTAA 786 50.64 MATAPSLREENVYMAKLAEQAERYEEMVEFMEKVSASIDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDHHVSVIRDYRSKIESELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDEGADEIKEAPPKREEEKQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 797418 800181 + Cp4.1LG07g01440.1 Cpe07g00142 471949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00142 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cpe07g00142 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cpe07g00142 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cpe07g00142 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cpe07g00142 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cpe07g00142 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cpe07g00142 261 MobiDBLite consensus disorder prediction 242 261 - -
Cpe07g00142 261 Gene3D - 2 251 IPR036815 -
Cpe07g00142 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Cpe07g00142 261 Coils Coil 7 34 - -
Cpe07g00142 261 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Cpe07g00142 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cpe07g00142 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cpe07g00142 261 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 253 - -
Cpe07g00142 261 SMART 1433_4 8 251 IPR023410 -
Cpe07g00142 261 MobiDBLite consensus disorder prediction 243 261 - -
Cpe07g00142 261 PANTHER 14-3-3 PROTEIN 5 253 IPR000308 -
Cpe07g00142 261 PIRSF 14-3-3 2 250 IPR000308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00365 Cpe07g00142 CCT
Cpe07g00142 Cpe11g00447 CCT
Cpe06g00431 Cpe07g00142 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01379 Cpe-Chr2:12113181 Cpe07g00142 Cpe-Chr7:797418 1.08E-162 dispersed
Cpe03g00956 Cpe-Chr3:7368376 Cpe07g00142 Cpe-Chr7:797418 7.35E-162 dispersed
Cpe07g00142 Cpe-Chr7:797418 Cpe07g00156 Cpe-Chr7:916270 1.53E-132 dispersed
Cpe11g00447 Cpe-Chr11:2537299 Cpe07g00142 Cpe-Chr7:797418 0 wgd
Cpe02g00365 Cpe-Chr2:2010903 Cpe07g00142 Cpe-Chr7:797418 7.54E-176 wgd
Cpe06g00431 Cpe-Chr6:2467354 Cpe07g00142 Cpe-Chr7:797418 2.66E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00142 K06630 - csv:101220164 498.049