Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00150 ATGGCTCTACGAAGAGAAGCAAATTGGGACGCCATTCCAACTGAAATCACCGATCTCAATGCTTGGGCGTTCGATTACTGTTTTGATCAGAACGTTTCCAATTTCCACCCAAATTCATCATCGGAACCTCTATCCACTCAGAATCTGGATGAATTTTATCATCCTTTGGCAAACGAGTTCTCAGTTCCAGAAATGGCCGATTCCGCCTACGCCGCCATGGAAGTAGCTGCGCCTCTGCCATTTCAAGCAGAGCGTCCGAATGTGGAGGGAGAAGAAGAGGAAGAGGAATTAGGTTTTCTCGCAAACGAGATTCAGAACATGGAGGCGGTTCATGTTCAATCGTCTTGCAAAGCGGAGCCGAATCAGTCTCCAGAACTCCCCGTTTTCAACATCGGAACATGCGCTCTCGAACGGAAGAACGGACCGAAGAAATTACAAGGCCAACCGTCGAAGAATCTGATGGCTGAAAGAAGGAGAAGGAAGCGCTTGAACGATNTCCTATTTCTGTTCTCAGTTCCAGAAATGGCCGATTCCGCCTACGCCGCCATGGAAGTAGCTGTGCCTCTGCCATTTCAAGCAGAGCGTCCGAATGTGGAGGGAGAAGAAGAGGAAGAGGAATTAGGTTTTCTCGCAAACGAGATTCAGAACATGGAGGCGGTTCATGTTCAATCGTCTTGCAAAGCGGAGCCGAATCAGTCTCCAGAACTCCCCGTTTTCAACATCGGAACATGCGCTCTCGAACGGAAGAACGGACCGAAGAAATTACAAGGCCAACCGTCGAAGAATCTGATGGCTGAAAGAAGGAGAAGGAAGCGCTTGAACGATCGCCTCTCAATGCTCAGATCCATCGTTCCTAAGATCAGCAAGATGGACCGAACTGCGATTCTAGCAGATGCAATAGATTACATGAAAGAATTGCTGGAGAAGATCGGAAATCTGCAAAGAGAAATGGATCGAACAAATCAAACAACTAGGAATTCATTCCACGACACAAAACCGAGCGAATTCGTAGTGAGAAATTCACCAAAATTTGAGGTGGAAAGCAGAAACGGAAACACGAGGATCGAGATTTACTGTGCGGCGAAGCCAGGATTACTGCTATCGACGGTGAATACGATCGAAGCATTGGGGCTTGAGATTCAACACTGTGTAATCAGCTGCTTCAATGACTTCGCATTGCAAGCCACTTGTTCTCAGGAACTGAAGCCTGAAGAATTGAAGGAAGCTTTATTTAGAAATGCAGGCTATGGAGGAAGCTGCTTGTAG 1266 47.16 MALRREANWDAIPTEITDLNAWAFDYCFDQNVSNFHPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNMEAVHVQSSCKAEPNQSPELPVFNIGTCALERKNGPKKLQGQPSKNLMAERRRRKRLNDXLFLFSVPEMADSAYAAMEVAVPLPFQAERPNVEGEEEEEELGFLANEIQNMEAVHVQSSCKAEPNQSPELPVFNIGTCALERKNGPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQREMDRTNQTTRNSFHDTKPSEFVVRNSPKFEVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 849756 852793 - Cp4.1LG07g01480.1 Cpe07g00150 471957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00150 421 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 257 306 IPR011598 GO:0046983
Cpe07g00150 421 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 171 421 - -
Cpe07g00150 421 CDD ACT_UUR-ACR-like 353 394 - -
Cpe07g00150 421 Pfam Helix-loop-helix DNA-binding domain 263 306 IPR011598 GO:0046983
Cpe07g00150 421 PANTHER DNA BINDING PROTEIN 34 168 - -
Cpe07g00150 421 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 34 168 - -
Cpe07g00150 421 SMART finulus 263 312 IPR011598 GO:0046983
Cpe07g00150 421 Gene3D - 253 323 IPR036638 GO:0046983
Cpe07g00150 421 PANTHER DNA BINDING PROTEIN 171 421 - -
Cpe07g00150 421 Coils Coil 200 220 - -
Cpe07g00150 421 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 323 IPR036638 GO:0046983
Cpe07g00150 421 Coils Coil 296 323 - -
Cpe07g00150 421 Coils Coil 90 110 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00658 Cpe-Chr3:3925974 Cpe07g00150 Cpe-Chr7:849756 1.21E-36 dispersed
Cpe06g00467 Cpe-Chr6:2750571 Cpe07g00150 Cpe-Chr7:849756 8.72E-21 dispersed
Cpe07g00150 Cpe-Chr7:849756 Cpe09g00942 Cpe-Chr9:8431363 1.10E-42 dispersed
Cpe10g00525 Cpe-Chr10:3080435 Cpe07g00150 Cpe-Chr7:849756 4.43E-12 wgd
Cpe11g00494 Cpe-Chr11:2865517 Cpe07g00150 Cpe-Chr7:849756 4.14E-88 wgd
Cpe19g00722 Cpe-Chr19:5635671 Cpe07g00150 Cpe-Chr7:849756 1.56E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49712 PF00010 HLH 9.00E-10 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00150 - - csv:101221329 363.999