Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00154 ATGGTGGTGACAACGGAAGAGCACCAGATCAAAAGTGCGCGGAACCTTTCACGCATTTCGATATCGGAGGAGATTCAATCGCTTACCGAAACCAATGGCTATGGCGCTTCGAAGATTCGCCGTCGGCGTTACCAAATCCAACGTTCCTCTCGTCAATGGCCGTCTTCTCTGTCCGGTGCCGCTGCGGAGGAAAGGGACAAGGCTCGAGCTACTTGGATTAAGCAGCTGAACGCCCCCCTCGAGGTCATTGATCCGGAAATTGCAGACATCATTGAGCTCGAGAAAGCTCGTCAATGGAAGGGTTTTGAACTTATACCTTCTGAGAATTTCACTTCATCATCAGTGATGGAAGCAGTTGGTTCAGTCATGACCAACAAGTACAGTGAAGGATATCCTGGTGCCAGATACTATGGTACATTGACATGGCTGAAACCTTGTGCCAGAAACACTGATACCAAGAAGATTTCTGCCGTTTCAATATTCTTCGAGACAGTGCCATATAGGTTGGATGAGAGCACTGGTTACATTGACTATGACCAGGTGCTCTATGACTACGAAGACAAAATTAATCAGGCTGTCTTTCCTGGTCTTCAAGGCGGCCCACACAACCACACCATAACTGGTCTGGCAGTTGCACTAAAGCAGGCCACAACTCCGGAATACAAAGCCTACCAAGAGCAGGTTCTTAGTAATTCTTCCAAATTTGCTCAGAGTTTGATTGAGAAGGGCTATGAACTTGTATCTGGTGGAACTGACAACCATTTAGTCCTTGTGAATTTGAAAAATAAGGGTATCGATGGCTCGAGAGTCGAGAAGGTTTTGGAATCGGTTCATATTGCAGCTAACAAGAACACAGTTCCAGGGGACGTGTCTGCCATGGTTCCTGGTGGCATCCGTATGGGGACCCCTGCCCTGACCTCAAGAGGTTTCCTTGAGGCAGATTTTGTGAAAGTAGCTGAATATTTCGATGAAGCTGTGAAGTTAGCCTTGAAGATTAAGGCCAATAGCGAAGGTACTAAGTTGAAGGATTTCGTAGCAACCATGCAAGCAAATAAAGACTTCCAATCTGAAATTTCAAAGCTCCGACTCAAATGGATTAAGCCGCTGAACCTTCCGATCGAGGTCGTTGCTCCGGAAGTGGCGGAAATCATCGAGCTTGAGAAAGCTCGTCAGTTCCAGGGTCTTGAGCTTATACCTTCTGAGAATTTCTGCGCAAGAGCAGTGATGGAAGCCGTCGGTTCGATTATGACCAATTCATACAGTGAAGGATATCCCGGTGCCAGATACTATGGAGGAATTGAGTACGCTGACATCATCGAAAATTTGTGCAAGGAACGTGCCCTAGAAGCCTTTCGATTGGACCCTGCAAAATGGGGAGGTTCCCCACACAACCATAAAATAGCTGGTCTGGTGATTGCACTAAAGCAGGCCACAACTCCGGAATACAAAGCCTACCAACAACAGGTTCTCAATAATTCTTCAAGATTTGCTCAGTGTTTGATTGAGAAGGGCTATGAACTTGTATCTGGTGGAACTGATAATCATTTACTCCTCATAAATTTGAAAAATAAGCTAACAAGAACACAGTACCGGGGGACGTGTCTGCCATGGTTCCTGGTGGCATCCGTATGGCTTCGACATGAGGTCGAGAAGTTCTCCAAGCAATTTGCAATCAATGCTAGCGTGTCGTATCAGAAAAATCACTCGCTAATTCAACTGAATGTTGATGCGGAGCCGAAGTTTGTAGACGTACGTGAAGCTCTGTCTCTGTTGAAAGAAGGTACGACGGCTGGAGCTTATCCTACAAATTTTACACTCGGAATAGTGTTGAATGCTTGTTCTTCCCTGCAATCTATCGAATTGGGGAAGCAAGTTCATGCATATATCATCAAGTATCACTTAGATTTTGATACTAGTATTGGCAACTCTCTTTCTAGCTTCTATTCTAAATTTGGGTGCTTGGAACTCGCTATCAGGGCCTTCCAGAAAATTAAGGAAAAGAATGTCATTTCATGGACTTCAGTTGTATCTGCCTGTGGTGATAATGGTCAAGCAGCTCGGAGTTTAAGTTTCTTTACCAAGATGCTCTCAGAAGGCGTGGAGCCGAATGAATATACTCTCACCAGTATCTTGAGCACTTGTTGTGTGATGCTAACATTGAGTCTAGGAGCACAGATTCATTCACTAAGCATTAAGCTTGGTTATGGTTCAAGCATACCTATAAAAAATTCTGTCATGTACTTATACCTGAAATGTGGATGGCTTATTGAGGCTCAGAAATTGTTCGAAGGTATGGAGACCCTCAATTTGATTACATGGAATTCAATGATCGCAGGGCATGCAAAAATGATGGATGCTGCTGAAGATGATCTTGCAGCTCACAAGAGTGGATCCACAGCACTTAATATGTTCCAGAAATTACATCGCTCGGGTATAAAGCCTGATCTGTTCACTTTCTCCAGTGGTCTTGAAGTTATAGCGTCAGAGAATTTCTGCTCAAGAGCAGTGATGGAAGCAATTGGTTCGATTATGACCAATTCATCTAGTGATGGATATCCCGGTGCCAGATACAGTGGAGGAACTGAGTATGTGGACATCATTGAAAACTGGTGCATGGAACGTGCTCTACAAGTTTTTCGTTTGGACCCTGCGAAATGGGGAGTTAACGTGCAGACTCTCACTGGATCCATAGCTAACTTTCAGACATATACTGGATTATTAAAACCTCATGAGAGGATACTGTCTCTTGATTTACCACATGGTGGACACCTTTCTCATGGTTATCAGACGGCTACCAAGAAAGTTTCTGCTGTTTCATTATTCTTCGAGACAATGCATTATAGGTTGGATGAGAAAACTGGTTACATTGACTATGATGGGGCAATCATGATGGCAGACATGGCACATCTTGCTGGTTTAGTTGCAGCAGACGTTATTCCATCTCCTTTTGAGTATGCTGATATTGTGACAACAACCACAAATAAATCCTTACGTGGACCACGAGGAGCTCTGATTTTCTTCCGAAAGGGCGTGCTCTATGACTATGAAGACAAAATCAATAACGCTGCAATGACTCCGGAATACAAAGCCTACCAACAGCAGGTTCTCAGGAATTCTTCAAAACTTGCTCAGTGTTTGATTGAGAAGGGGTATGAGCTTGTATCTGGTGGAACTGATAATCATTTAGTCCTTATAGATTTGAAAAATAAGTTGGCCTTGAAAATTAAGGCCGCTGAACCTAAAGGCGCTAAGTTTAAGAATTTCGAGACAACCATGAAATCAAATAAAGAATTTCAATCTGAAATTTCAAAGCTACGACGTGAGGTTGAGGAGTTTGCCATGCAGTTTCCAACAATAGATATCTTCATTGTTAAGAAAAGAAAAGAATGGAAAGTTGGAAGTGAAAGTACGGTGACGGTACTCTTTTTGCTTGCTTTCGGTGGAGTCATGATTTTTTCTTTTTTGAAAATCCTCGAATTGATTTTACGGACTTCTGTTCTTGGTTTGCGAGATCGATCAGTTGAGTTGGAGTGTGAAACTGTGGATTCTGAGTGTTGGATACTTAATTTGTTCTCGCTAATCCAACTGAATGTTGATGCGGAGCCGAAGATTGTAAACTTGCGTGAAGCTCTGTCTCTGTTGAAAGAAGCCATAGACAGCGATTTAGCTGCAGAAAAGGAAATTATCCATGGACATATCGGTAAAACTGGGACATATGAAGACCTATTTGTAATGACAAGAAATGCGGTTGCATGGACTACTCTAGTGACTGGTTATGTTCAGAATTCGCAGCCTCTGCCTGCCCTTAAAGTATTCATCGAAATGTTGCAGACTGGAGCTTATCCTACAAATTTTACCCTCCGAATAGTCAAGCAGTTTGGAGTCCCAAGTTTTTTTTTGTCGAGATGCTCTCAGAAGCATATTGAAGCTCAGAAACTGTTCGAAGGTATGGAAACCCTCATTTTGATTACATGGAATGCGATGATTGCAGGTCATGCAAAAATGATGGATGTTGCTGCTGATGATCTTGCAGCTCATAAGAGTGGATCCATAGCACTTAATATGCTCCAGAAATTATATCGCTCGGGTATGAAACCTCTCTGTTCACTTTCTCCAGTGTTTGAAGTACTAGTAACCTTAGAACAAGGGGTACAAATTCATGCTCTGATCATTAAGAGGGGTGTTTCGGGAGATGTTCTTGTGGGAACTGCATTGGTTAGTATGTATAGCAAATGTGGAAGTATTGATGAGGCAATATTGAATTTAACGAAATGTTCTAAATTTTTGGGAATCAAAGGTAATTTAAAAGGAATAGGAGGACTAGAAAAGAAAAAAAAAACATCTCAAATCTATCCATTAAAAATGCTTTCTAATATCTCCCATGATCCCTATATATGGAATGAATTAGTTAACATTATAGTAAAAGAAAAAAAATACAGTTTATATTTTTTAAAACATTTTTCATATCGGTGGAGGCAATCGCCGGCGGAAACCAATGGCAATGTTTCTGAGAAAAGTCGCCGTCGGCGTTACAAAACCCAACGTTGCTCCGGTGAATGGGCGGTTCCTCCTCCGTCACATGGTTGTTTTTCTCTCTCCTCGCCGCTAATTCATAATATCTATGATTTTTCTGTTTTGATGCCCAAATTTTCCGTCGGTTTTCTTTGTCCGCAGTCGTCTGTTTGCAGGTCCACGGCGGAGGAAAGGGAAGCTCGAGCTACGGGTCTTGAGCTTATACCTTCCGAGAATTTCTGCCCAAGAGCAGTAATGGAAGCAGTTGGTTCGATATTGACCAATTCATATAGTGAAGGATATCCGGGTGCCAGATACTATGGAGGAACTGAGTACGCTGATATCATCGAGAACTTGTGCAAGAAACGTGTGTTTGAAGCGTTCCGTTTGGACCCTGCAAAATGGGGAGTTAACGTGCAGACTTTCACTGGATCTATAGCTAACTTTCTGACATACAGTGCATTATTAAAACCTCACGAGAGGATAATGTCTCTTGATTTACCACATGGTGGACACCTTTCGCACGGTTATCAGACTGCTACCAAGAAAGTTTCTCTTGTTTCAATGTTCTTCGAGACAATGCCATATAGGTTGGATGAGAGAACTGGTTACATTGACTATGATGGGGCCACAACTCCGGAATACAAAGCCTACCAACAACAGGTTCTCAATAATTCTTCAAGATTTGCTCAGTGTTTGATTGAGAAGGGCTATGAACTTGTATCTGGTGGAACTGATAATCATTTACTCCTCGTGAATTTGAAAAATAAGAACACAGTTCCAGGGGACGTGTCTGCCATTTCTCCGAGTGGCATTCGTATGGGAACCCCTGCTCTTACTTCCAGAGGCTTCCTCGAAGCAGATTTTGTGAAAGTAGCTGAATTCTTTGATGAAGCTTTGAAGTTAGCCTTGAAGATTAAGGCTGCTGAGCCTAAAGGTGCTAAGTTGAAGGATTTCAAGGCAACCGTGCAATCAAATAAAGAATTCCAATCTGAAATTTCAAAACTCCGACGTGAGGTTGAGGAGTTTTCCAAGCAATTTCCAACGGTAGGTTTTGAGAAAGAGACAATGAAATATAGAGACTGA 5598 42.5 MVVTTEEHQIKSARNLSRISISEEIQSLTETNGYGASKIRRRRYQIQRSSRQWPSSLSGAAAEERDKARATWIKQLNAPLEVIDPEIADIIELEKARQWKGFELIPSENFTSSSVMEAVGSVMTNKYSEGYPGARYYGTLTWLKPCARNTDTKKISAVSIFFETVPYRLDESTGYIDYDQVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNSSKFAQSLIEKGYELVSGGTDNHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEADFVKVAEYFDEAVKLALKIKANSEGTKLKDFVATMQANKDFQSEISKLRLKWIKPLNLPIEVVAPEVAEIIELEKARQFQGLELIPSENFCARAVMEAVGSIMTNSYSEGYPGARYYGGIEYADIIENLCKERALEAFRLDPAKWGGSPHNHKIAGLVIALKQATTPEYKAYQQQVLNNSSRFAQCLIEKGYELVSGGTDNHLLLINLKNKLTRTQYRGTCLPWFLVASVWLRHEVEKFSKQFAINASVSYQKNHSLIQLNVDAEPKFVDVREALSLLKEGTTAGAYPTNFTLGIVLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVISWTSVVSACGDNGQAARSLSFFTKMLSEGVEPNEYTLTSILSTCCVMLTLSLGAQIHSLSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAEDDLAAHKSGSTALNMFQKLHRSGIKPDLFTFSSGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYVDIIENWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERILSLDLPHGGHLSHGYQTATKKVSAVSLFFETMHYRLDEKTGYIDYDGAIMMADMAHLAGLVAADVIPSPFEYADIVTTTTNKSLRGPRGALIFFRKGVLYDYEDKINNAAMTPEYKAYQQQVLRNSSKLAQCLIEKGYELVSGGTDNHLVLIDLKNKLALKIKAAEPKGAKFKNFETTMKSNKEFQSEISKLRREVEEFAMQFPTIDIFIVKKRKEWKVGSESTVTVLFLLAFGGVMIFSFLKILELILRTSVLGLRDRSVELECETVDSECWILNLFSLIQLNVDAEPKIVNLREALSLLKEAIDSDLAAEKEIIHGHIGKTGTYEDLFVMTRNAVAWTTLVTGYVQNSQPLPALKVFIEMLQTGAYPTNFTLRIVKQFGVPSFFLSRCSQKHIEAQKLFEGMETLILITWNAMIAGHAKMMDVAADDLAAHKSGSIALNMLQKLYRSGMKPLCSLSPVFEVLVTLEQGVQIHALIIKRGVSGDVLVGTALVSMYSKCGSIDEAILNLTKCSKFLGIKGNLKGIGGLEKKKKTSQIYPLKMLSNISHDPYIWNELVNIIVKEKKYSLYFLKHFSYRWRQSPAETNGNVSEKSRRRRYKTQRCSGEWAVPPPSHGCFSLSSPLIHNIYDFSVLMPKFSVGFLCPQSSVCRSTAEEREARATGLELIPSENFCPRAVMEAVGSILTNSYSEGYPGARYYGGTEYADIIENLCKKRVFEAFRLDPAKWGVNVQTFTGSIANFLTYSALLKPHERIMSLDLPHGGHLSHGYQTATKKVSLVSMFFETMPYRLDERTGYIDYDGATTPEYKAYQQQVLNNSSRFAQCLIEKGYELVSGGTDNHLLLVNLKNKNTVPGDVSAISPSGIRMGTPALTSRGFLEADFVKVAEFFDEALKLALKIKAAEPKGAKLKDFKATVQSNKEFQSEISKLRREVEEFSKQFPTVGFEKETMKYRD 1865
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 875795 912269 - Cp4.1LG07g01650.1 Cpe07g00154 471961

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00154 1865 SUPERFAMILY PLP-dependent transferases 375 459 IPR015424 -
Cpe07g00154 1865 Gene3D - 961 1029 IPR015421 GO:0003824
Cpe07g00154 1865 Gene3D - 180 222 IPR015421 GO:0003824
Cpe07g00154 1865 Gene3D Tetratricopeptide repeat domain 579 728 IPR011990 GO:0005515
Cpe07g00154 1865 Gene3D Tetratricopeptide repeat domain 1180 1371 IPR011990 GO:0005515
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 149 181 - -
Cpe07g00154 1865 Gene3D Aspartate Aminotransferase, domain 1 223 369 IPR015422 GO:0003824
Cpe07g00154 1865 Gene3D Aspartate Aminotransferase, domain 1 1720 1760 IPR015422 GO:0003824
Cpe07g00154 1865 Gene3D Aspartate Aminotransferase, domain 1 1030 1081 IPR015422 GO:0003824
Cpe07g00154 1865 Pfam PPR repeat family 667 715 IPR002885 -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 45 140 - -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 1570 1712 - -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 961 1023 - -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 821 959 - -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 362 459 - -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 45 140 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 181 362 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 149 181 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 Gene3D Aspartate Aminotransferase, domain 1 464 535 IPR015422 GO:0003824
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 1714 1864 - -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 181 362 - -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 961 1023 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 460 524 - -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 1070 1120 - -
Cpe07g00154 1865 SUPERFAMILY PLP-dependent transferases 1563 1855 IPR015424 -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 821 959 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 Coils Coil 1095 1115 - -
Cpe07g00154 1865 Pfam Serine hydroxymethyltransferase 1714 1799 IPR039429 -
Cpe07g00154 1865 Pfam Serine hydroxymethyltransferase 460 525 IPR039429 -
Cpe07g00154 1865 Pfam Serine hydroxymethyltransferase 81 142 IPR039429 -
Cpe07g00154 1865 Pfam Serine hydroxymethyltransferase 1563 1712 IPR039429 -
Cpe07g00154 1865 Pfam Serine hydroxymethyltransferase 375 459 IPR039429 -
Cpe07g00154 1865 Pfam Serine hydroxymethyltransferase 821 959 IPR039429 -
Cpe07g00154 1865 Pfam Serine hydroxymethyltransferase 181 321 IPR039429 -
Cpe07g00154 1865 Pfam Serine hydroxymethyltransferase 960 1022 IPR039429 -
Cpe07g00154 1865 Gene3D - 830 960 IPR015421 GO:0003824
Cpe07g00154 1865 Gene3D - 1583 1719 IPR015421 GO:0003824
Cpe07g00154 1865 Gene3D - 109 148 IPR015421 GO:0003824
Cpe07g00154 1865 Gene3D - 402 461 IPR015421 GO:0003824
Cpe07g00154 1865 TIGRFAM PPR: pentatricopeptide repeat domain 670 704 IPR002885 -
Cpe07g00154 1865 Pfam PPR repeat 1250 1277 IPR002885 -
Cpe07g00154 1865 Pfam PPR repeat 743 768 IPR002885 -
Cpe07g00154 1865 SUPERFAMILY PLP-dependent transferases 808 1120 IPR015424 -
Cpe07g00154 1865 Coils Coil 1830 1850 - -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 1023 1070 - -
Cpe07g00154 1865 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 668 702 IPR002885 -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 1023 1070 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1248 1282 IPR002885 -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 362 459 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 1070 1120 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 460 524 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 1570 1712 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 Gene3D Aspartate Aminotransferase, domain 1 1761 1856 IPR015422 GO:0003824
Cpe07g00154 1865 SUPERFAMILY PLP-dependent transferases 76 361 IPR015424 -
Cpe07g00154 1865 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 1714 1864 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Cpe07g00154 1865 SUPERFAMILY PLP-dependent transferases 460 525 IPR015424 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00154 - - K00600 csv:101207363 398.282
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00154 Cpe-Chr7:875795 Cpe14g00322 Cpe-Chr14:1903467 1.83E-20 dispersed
Cpe17g00277 Cpe-Chr17:1848307 Cpe07g00154 Cpe-Chr7:875795 6.52E-18 dispersed
Cpe07g00153 Cpe-Chr7:872230 Cpe07g00154 Cpe-Chr7:875795 7.04E-11 tandem
Cpe10g00527 Cpe-Chr10:3089108 Cpe07g00154 Cpe-Chr7:875795 4.53E-07 wgd
Cpe19g00726 Cpe-Chr19:5651452 Cpe07g00154 Cpe-Chr7:875795 3.74E-14 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g58 . . . . . . . . . . . . . . Sed07g1476 Cpe07g00154 . Bhi04g00909 Tan02g2503 . . Hepe10g0407 . Lcy13g1458 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cma12g00180 . . . . . . . . . . . Cla08g01180 Cam08g1645 Cec08g1219 Cco08g1340 Clacu08g1340 . Cre08g1126 . Csa02g02227 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010527 1 1 1 1 1 1 2 1 1 1 1 1 2 0 0 2 1 1 2 1 1 0 1 1 0 1 1 0 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe07g00154 Cpe_Chr07 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0