Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe07g00165 | ATGAAAGGCGATTCCACCGCTACCGGTGTACATCCGCTGTTTAAGCACTTTTCCGACCCCAGCTCCGCCGTCACCGACGGCTCCACCATCGAGGTGGTGCGGCGGCCGAGGGGTCGACCGCCGGGGTCCAAAAATAAACCGAAACCGCCTCTTGTCATAACCCGGGAAAACGACTCGGCTATGCGGCCGTATGTTCTAGAAGTGCCTGGAGGAAACGACGTCGTTGAAGCAATTTCGCGATTTTGTTGTCGGAAGAATATGGGTCTTTGTGTTCTTAACGGTTCTGGGACGGTTGCGAATGTTTCTCTCCGGCAACCCTCTGCAACTTCCGGCGCCGCCGTCACGTTTCACGGCCGGTTTGAAATACTTTCCATTTCGGCTACTGTGTTTCCTCAAACGACGACGTTTCCTCTTCCCAATGGCTTCACCATCTCCCTTGCTGGACCTCAGGGACAAATCGTCGGCGGGTTGGTCGCCGGCGCCTTGATTTCCGCTGGTACGGTTTTTGTCGTTGCCTCGTCGTTCAATAACCCCTTCTACCACCGGCTACCGGATCAGAATGAGATTCAGAATTTGGGATCCGGCGGCAGCGGCGAGGCTCATTCCCCACATGTCTCCGGCGGCGGAGATAGTAGCGGGCACGGCCACGGGCAACCACTTCTGGAATCGTGTGGAGTGGCTATGTTTAGTTGCCACGCACCGTCCGATGTAATATGGGCGCCGACGGCGAGACAACCGCCGCCGCCGCCGCCATACTGA | 759 | 57.31 | MKGDSTATGVHPLFKHFSDPSSAVTDGSTIEVVRRPRGRPPGSKNKPKPPLVITRENDSAMRPYVLEVPGGNDVVEAISRFCCRKNMGLCVLNGSGTVANVSLRQPSATSGAAVTFHGRFEILSISATVFPQTTTFPLPNGFTISLAGPQGQIVGGLVAGALISAGTVFVVASSFNNPFYHRLPDQNEIQNLGSGGSGEAHSPHVSGGGDSSGHGHGQPLLESCGVAMFSCHAPSDVIWAPTARQPPPPPPY | 252 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 981737 | 982495 | - | Cp4.1LG07g01590.1 | Cpe07g00165 | 471972 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe07g00165 | 252 | Gene3D | - | 61 | 193 | - | - | |
| Cpe07g00165 | 252 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 59 | 187 | - | - | |
| Cpe07g00165 | 252 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED | 19 | 250 | - | - | |
| Cpe07g00165 | 252 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
| Cpe07g00165 | 252 | MobiDBLite | consensus disorder prediction | 186 | 217 | - | - | |
| Cpe07g00165 | 252 | ProSiteProfiles | PPC domain profile profile. | 58 | 196 | IPR005175 | - | |
| Cpe07g00165 | 252 | CDD | DUF296 | 62 | 175 | IPR005175 | - | |
| Cpe07g00165 | 252 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 62 | 177 | IPR005175 | - | |
| Cpe07g00165 | 252 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 19 | 250 | IPR014476 | GO:0003680 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe07g00165 | Cpe-Chr7:981737 | Cpe01g01079 | Cpe-Chr1:6366461 | 1.06E-43 | dispersed | |
| Cpe18g00192 | Cpe-Chr18:3596933 | Cpe07g00165 | Cpe-Chr7:981737 | 4.69E-49 | transposed | |
| Cpe11g00483 | Cpe-Chr11:2791560 | Cpe07g00165 | Cpe-Chr7:981737 | 4.54E-112 | wgd | |
| Cpe02g00342 | Cpe-Chr2:1843698 | Cpe07g00165 | Cpe-Chr7:981737 | 2.20E-90 | wgd | |
| Cpe06g00453 | Cpe-Chr6:2640759 | Cpe07g00165 | Cpe-Chr7:981737 | 1.80E-92 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe07g00165 | - | - | cmos:111454367 | 441.425 |