Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe07g00182 | ATGGCGCCTAGTTTTGACCTTGCAGTTACCAATCTTCTATGCGCTGAAGAAAATTGTATTTTCGATGATAACGATGATGACGAGTTTCTGGTCGCTCCTTGTGTTCTTACGAGTAATGGGTTTCAGAGTTTGCGTCACGGCGGCGGTCACGGCGGCGATGGGTTTCCGTTTACAAGCGATGAATGTTTGATTGAAATGGTGGAGAAGGAAACCCACCACTTGCCTGTTGATGGGTATCTCATGAAATTGCAAAACGGCGAGTTGGATGTTGGGGCTAGAAAAGATGCTGTCGATTGGATTGAACAGGTGAGTGCTCGTTTCAATTTTGGTCCTCTCTGCACATACTTAGCCGTAAACTACATGGATCGATTCCTCTCCGCTTACACTCTACCAAAAGGTAAAGTTTGGACAATGCAGCTACTGGCAGTGGCATGTCTGTCTCTTGCAGCCAAATTGGAGGAGACTGAAGTCCCAATCTCGTTGGATTTACAGGTGGGTGGATCTAAATTTGTGTTTGAAGCAAGAACCATTGAGAGAATGGAGCTTTTAGTGTTGACAACATTAGGGTGGAGAATGCAAGCCGTTACGCCGTTCTCGTTTATCGATCATTACCTCAGCAAGATCCATCACGACGACAAGACATCGATCACCCGTTCGATTCGTTTACTATTGAACATAATTCAAGGGATCGAGTTCTTGGAATTCAAACCATCCGAGATTGCAGCAGCAGTGGCAATATCAGTAGCTGGAGAAGGTGAAGAAGAGACAGCAATTCCTCTTCTAATTCAGCCGAAACTCCACATGGAAAGAGTAGTGAAGTGCATTAAGTTAGTGAAGGAGATGTCGGGGAAGACGGAGGAGGAGTCGAGGTCGATGTCGGAGGGGCCGCAGAGCCCGAGCGGGGTATTGAACGTGAGGTGCTTAAGCTATAACAGCAATGAAAGTACAGCAGTTGGGTCATGTGCAAATTCTTCTTCACAACATAACGGTTCAAATGGTTCAAAGAGGAGGAGATTGAACAGAGCCTGTGAAGTGGAGCTTTAG | 1044 | 46.17 | MAPSFDLAVTNLLCAEENCIFDDNDDDEFLVAPCVLTSNGFQSLRHGGGHGGDGFPFTSDECLIEMVEKETHHLPVDGYLMKLQNGELDVGARKDAVDWIEQVSARFNFGPLCTYLAVNYMDRFLSAYTLPKGKVWTMQLLAVACLSLAAKLEETEVPISLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLSKIHHDDKTSITRSIRLLLNIIQGIEFLEFKPSEIAAAVAISVAGEGEEETAIPLLIQPKLHMERVVKCIKLVKEMSGKTEEESRSMSEGPQSPSGVLNVRCLSYNSNESTAVGSCANSSSQHNGSNGSKRRRLNRACEVEL | 347 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1142682 | 1144925 | + | Cp4.1LG07g02590.1 | Cpe07g00182 | 471989 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe07g00182 | 347 | Gene3D | - | 76 | 193 | - | - | |
| Cpe07g00182 | 347 | Pfam | Cyclin, C-terminal domain | 195 | 287 | IPR004367 | - | |
| Cpe07g00182 | 347 | PANTHER | CARBOXY-TERMINAL DOMAIN CYCLIN | 1 | 339 | - | - | |
| Cpe07g00182 | 347 | PANTHER | CYCLINS | 1 | 339 | IPR039361 | - | |
| Cpe07g00182 | 347 | SMART | Cyclin_C_2 | 195 | 311 | IPR004367 | - | |
| Cpe07g00182 | 347 | MobiDBLite | consensus disorder prediction | 318 | 347 | - | - | |
| Cpe07g00182 | 347 | CDD | CYCLIN | 93 | 185 | IPR013763 | - | |
| Cpe07g00182 | 347 | Pfam | Cyclin, N-terminal domain | 66 | 192 | IPR006671 | - | |
| Cpe07g00182 | 347 | MobiDBLite | consensus disorder prediction | 318 | 333 | - | - | |
| Cpe07g00182 | 347 | Gene3D | - | 65 | 255 | - | - | |
| Cpe07g00182 | 347 | SUPERFAMILY | Cyclin-like | 57 | 192 | IPR036915 | - | |
| Cpe07g00182 | 347 | SMART | cyclin_7 | 98 | 186 | IPR013763 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe07g00182 | Cpe-Chr7:1142682 | Cpe11g00745 | Cpe-Chr11:5841771 | 1.15E-56 | dispersed | |
| Cpe16g00470 | Cpe-Chr16:5850612 | Cpe07g00182 | Cpe-Chr7:1142682 | 3.59E-37 | dispersed | |
| Cpe10g00541 | Cpe-Chr10:3185468 | Cpe07g00182 | Cpe-Chr7:1142682 | 8.43E-84 | wgd | |
| Cpe11g00467 | Cpe-Chr11:2638096 | Cpe07g00182 | Cpe-Chr7:1142682 | 2.32E-139 | wgd | |
| Cpe19g00744 | Cpe-Chr19:5745874 | Cpe07g00182 | Cpe-Chr7:1142682 | 1.81E-87 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe07g00182 | K18810 | - | csv:101216206 | 486.878 |