Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00193 ATGGTGATGCCCGAGTCGTCTGAACGCCACCGGACCGCGTCTCGTCGAGCGAATCAACCGCCGACTCGGCCGCAACTTGGAGCTAGGGTTCCGCTCAAGCGGTTACTTCGCGTGGCATCTGTCGCATGTGGAATTCAATTCGGTTGGGCTTTGCAGCTCTCTCTTCTTACTCCTTATATTCAAGAGCTTGGTATTCCTCATGCTTGGTCAAGTCTCATATGGCTCTGTGGACCGCTTTCTGGCCTCTTTGTCCAGCCGCTCGTTGGCCACATGAGCGATCGCTGCACCAGCCGATACGGCCGCCGGAGGCCATTCATTGTAGCTGGAGCGCTTTCCATTGTACTCGCCGTTCTTATTATCGGTCACTCGGCGGACCTTGGTTGGTTGATTGGTGACAGAGGTGATGTTAGGCCTCGTGCGATTGGATTCTTTGTGTTTGGATTTTGGATTCTCGATGTCGCTAACAACTTAACGCAGGGTCCTTGTAGAGCTTTGCTTGCTGATCTTACCGGTAAGGATCATCGAAGGAATCGAGTGGCAAATGCTTATTTTTCACTATTTATGGCGATTGGTAATGTTTTTGGGTATGCCACTGGATCTTTTAGTGGCTGGTACAAGATCTTGCCGTTTACTCTTACCTCTGCATGCTCGGTTAATTGTGCAAATCTCAAGTCAGCTTTCTTGATTGATGTCGTATTCATTGCAATTACAACATATTTGAGTGTTTCAGCAGCTCAAGAGATTTCTCTAGATTCAAGCTGCAGGTCGTCCCTGGTAGTGGAAGAAGGTATGGGGCAATCAAGTCATGCTTCAGAAGCGTTTCTCTGGGAGTTGTTTCATACTTTTAGACACTTCTCCGGGTATATATGGGTAATTTTGCTTGTCACTTCCCTGACATGGGTAGCATGGTTTCCATTTATTCTATTTGATACTGATTGGATGGGTAGAGAGATTTATGGTGGCAAGCCAAATGAAGGACAGAGTTATAGTTCTGGAGTCAGAATGGGAGCATTTGGCCTGATGTTTAACTCTGTTGTCCTTGGAATAACTTCATTACTTATGGAGAAGCTGTGCAGAAAGTGGGGTGCTGGTTTTGTATGGGGAGTCTCTAATATTTTTATGGCTCTATGTTTCCTTTCTATACTGGTTGTCACCTATGTGGCAAACAATATGGGCTATATAGGCCATGAGCTTCCACCAAATAGTATCGTATCAGCTGCATTGATTATCTTTGCTCTTCTTGGCGTCCCTTTGGCAATTACTTACAGCATTCCATATGCCATGATCTCCTCGCGTGTTGAATCTTTGCAACTTGGTCAAGGTTTGTCTGCGGGTGTCTTGAACTTGGCAATAGTAATTCCTCAGGTTGTGGTATCCCTGGGAAGTGGACCATGGGATCAGCTGTTTGGTGGTGGAAATTCTCCAGCTTTTGCTGTGGCAGCATTTGCAGCCTTTGCAAGTGGACTCATTGCTATCGTGGCCCTTCCTCGGTCTAGTGCTCAGAATCCCAGAGCCCTCACATGA 1524 46.85 MVMPESSERHRTASRRANQPPTRPQLGARVPLKRLLRVASVACGIQFGWALQLSLLTPYIQELGIPHAWSSLIWLCGPLSGLFVQPLVGHMSDRCTSRYGRRRPFIVAGALSIVLAVLIIGHSADLGWLIGDRGDVRPRAIGFFVFGFWILDVANNLTQGPCRALLADLTGKDHRRNRVANAYFSLFMAIGNVFGYATGSFSGWYKILPFTLTSACSVNCANLKSAFLIDVVFIAITTYLSVSAAQEISLDSSCRSSLVVEEGMGQSSHASEAFLWELFHTFRHFSGYIWVILLVTSLTWVAWFPFILFDTDWMGREIYGGKPNEGQSYSSGVRMGAFGLMFNSVVLGITSLLMEKLCRKWGAGFVWGVSNIFMALCFLSILVVTYVANNMGYIGHELPPNSIVSAALIIFALLGVPLAITYSIPYAMISSRVESLQLGQGLSAGVLNLAIVIPQVVVSLGSGPWDQLFGGGNSPAFAVAAFAAFASGLIAIVALPRSSAQNPRALT 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1211848 1222603 - Cp4.1LG07g02570.1 Cpe07g00193 472000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00193 507 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 499 IPR005989 GO:0005887|GO:0008515|GO:0015770
Cpe07g00193 507 Gene3D MFS general substrate transporter like domains 32 495 IPR036259 -
Cpe07g00193 507 CDD MFS_SLC45_SUC 35 474 - -
Cpe07g00193 507 MobiDBLite consensus disorder prediction 1 26 - -
Cpe07g00193 507 Pfam MFS/sugar transport protein 48 196 - -
Cpe07g00193 507 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 8 505 - -
Cpe07g00193 507 PANTHER SUGAR TRANSPORTER 8 505 - -
Cpe07g00193 507 SUPERFAMILY MFS general substrate transporter 35 498 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00193 Cpe-Chr7:1211848 Cpe07g00646 Cpe-Chr7:4628819 1.58E-134 dispersed
Cpe07g00193 Cpe-Chr7:1211848 Cpe02g01353 Cpe-Chr2:11947402 1.80E-158 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00193 K15378 - csv:101220384 911.368