Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00201 ATGTCCAGAACGCTGCCATTTTTAAGAACTCTGCTCTCCGTTTACCTCTTCTACTTCGTATCCACACCCTTCTGTGTAAGCTCACTGACAGCCAAAACAGACCAGGCCATCTTGCTTGAGCTTAAAGATCAATGGGGGAATCCACCGTCTCTTCACCTGTGGAACTCCTCATCCTCGCCCTGCGATTGGCCTGATATCGTCTGTAGAGACGGCACAGTCACAGGAATCTCTCTCAGAGACAAGAATATCACTGGGAAAATTCCAATTGTCATCTGTGACCTGCAAAACCTCACTGAGCTTGATTTTTCATGGAACTATATCCCGGGTGAGTTCCCTGAGGCTCTGTTCAACTGTTCCAAGCTCAAGTATCTTGATCTTTCAGGAAACTATTTTGCGGGGTCGATACCACACGACATAGATCGACTTCGAACTCTGGAGTACATGGACCTTAGCGCCAACAACTTCTCAGGAGATTTTCCAGCAGCACTAGGCCGGTTGCCAGCTTTGAGAACTTTAAACATTTATCGAACTCAGTGCAATGGCACATTGCCAGCTGAAATTGGGAACTTGTCCAATCTTGAAACTCTGAGCTTGGCTTATAACACTTTGCTCGTCCCAACGCCAATACCACAAGAGTTTAGGAAACTGAAGAAATTGAAATATATGTGGATAAAAAAATCCAACTTGATTGGAGAAATACCAGAAGGCTTATCGGATCTTTTGAGCCTTGAGCACTTGGATTTATCCAGCAACAGTTTGGGAGTGGTTGCTTTCTCCAACAATCTTAGCGGCGAATTGCCAAGAGGGCTTGGCAATTGCAGGACCCTACGCACAATCCAGCTTTCTAATAATAACTTTTCTGGCGAATTACCTCCAGGTCTTTGGACTACTTTCAATCTATCAAGCATAATGTTAGATGGAAATTCATTCTCAGGCAAGTTACCAGATATCTTATCTTGGAATCTCTCGAGACTGACAATAAATAACAACAAATTTTGGGGTCAAATTCCTCAAAATGTGTCTTCTTGGAAGAACTTGGTTGTGTTTGAGGCAAGCAACAATCAGCTCTCTGGTAGATTTCCCGAAGGGTTGACAAGGCTTCCTCATCTTACCACACTCATATTAAGTGGAAATCAACTCTCTGGCCAACTTCCTTCAACAATTGAAGCGAATATCTTATCAAACCTGACAGAAACTAATCTGATTGGAAGTGGTGGATCCGGAAAAGTGTACTGCATAGATATAAACCATGCTGGTTACTATGTTGCAGTCAAAAGGATTTGGAGTAACAAGAAGTTGGATCAAAAGCTTGAGAAAGAATTTCAAGCAGAAGTTCAAATACTTGGCTCGATTCGGCATTCGAACATAGTGAAGTTGCTATGCTGCGTCTGGAATGAGAATTCAAGGCTGTTAGTCTATGAATACATGCAAAATCAGAGCCTAGATAAGTGGCTTCATAAAGAGAAGAAAAGGTTAAGAGCGGCTACAATGGATTTTGTTGAACAATATGTCTTAGACTGGCCGAGGAGGTTGCAGATTGCTATTGGAGCTGCACAAGGCCTGAGTTACATGCACCATGATTGCTCTCCACCAATCATTCATCGAGATGTAAAGTCAAGTAACATTTTATTAGACCATGAGTTCCACGCAAGGATAGCGGATTTCGGGCTGGCAAAGATGCTGGTCAGGCAGGGAGAGGCTTACACTATGTCTGCAATAGCAGGATCTTTTGGCTATATAGCCCCAGGAAAACCTATTGCTGATGCTCTTGATGAAGAAATCAGAAACCCACGCAATTTGGAAGAGATGATTACTCTGTTCAAACTAGAAGCGAATATCTTATCAAACCTGACAGAAACTAATCTGATTGGAAGTGGTGGATCCGGAAAAGTGTACTGCATAGATATAAACCATGCTGGTTACTATGTTGCAGTCAAAAGGATTTGGAGTAACAAGAAGTTGGATCAAAAGCTTGAGAAAGAATTTCAAGCAGAAGTTCAAATACTTGGCTCGATTCGGCATTCGAACATAGTGAAGTTGCTATGCTGCGTCTGGAATGAGAATTCAAGGCTGTTAGTCTATGAATACATGCAAAATCAGAGCCTAGATAAGTGGCTTCATAAAGAGAAGAAAAGGTTAAGAGCGGCTACAATGGATTTTGTTGAACAATATGTCTTAGACTGGCCGAGGAGGTTGCAGATTGCTATTGGAGCTGCACAAGGCCTGAGTTACATGCACCATGATTGCTCTCCACCAATCATTCATCGAGATGTAAAGTCAAGTAACATTTTATTAGACCATGAGTTCCACGCAAGGATAGCGGATTTCGGGCTGGCAAAGATGCTGGTCAGGCAGGGAGAGGCTTACACTATGTCTGCAATAGCAGGATCTTTTGGCTATATAGCCCCAGGAAAACCTATTGCTGATGCTCTTGATGAAGAAATCAGAAACCCACGCAATTTGGAAGAGATGATTACTCTGTTCAAACTAGGTCTAATTTGTACAAGCACGTTACCTGAAATACGACCTTCGATGAAGGAGGTTCTGCAGATTCTACGCCAATGCCGCCCTCAAGAAGATTGCAATGGGAGAAAGAACGCCGGCGAATTTGATGCCGTTCCCCTCCTTGGCACTTCTCTATGA 2643 42.94 MSRTLPFLRTLLSVYLFYFVSTPFCVSSLTAKTDQAILLELKDQWGNPPSLHLWNSSSSPCDWPDIVCRDGTVTGISLRDKNITGKIPIVICDLQNLTELDFSWNYIPGEFPEALFNCSKLKYLDLSGNYFAGSIPHDIDRLRTLEYMDLSANNFSGDFPAALGRLPALRTLNIYRTQCNGTLPAEIGNLSNLETLSLAYNTLLVPTPIPQEFRKLKKLKYMWIKKSNLIGEIPEGLSDLLSLEHLDLSSNSLGVVAFSNNLSGELPRGLGNCRTLRTIQLSNNNFSGELPPGLWTTFNLSSIMLDGNSFSGKLPDILSWNLSRLTINNNKFWGQIPQNVSSWKNLVVFEASNNQLSGRFPEGLTRLPHLTTLILSGNQLSGQLPSTIEANILSNLTETNLIGSGGSGKVYCIDINHAGYYVAVKRIWSNKKLDQKLEKEFQAEVQILGSIRHSNIVKLLCCVWNENSRLLVYEYMQNQSLDKWLHKEKKRLRAATMDFVEQYVLDWPRRLQIAIGAAQGLSYMHHDCSPPIIHRDVKSSNILLDHEFHARIADFGLAKMLVRQGEAYTMSAIAGSFGYIAPGKPIADALDEEIRNPRNLEEMITLFKLEANILSNLTETNLIGSGGSGKVYCIDINHAGYYVAVKRIWSNKKLDQKLEKEFQAEVQILGSIRHSNIVKLLCCVWNENSRLLVYEYMQNQSLDKWLHKEKKRLRAATMDFVEQYVLDWPRRLQIAIGAAQGLSYMHHDCSPPIIHRDVKSSNILLDHEFHARIADFGLAKMLVRQGEAYTMSAIAGSFGYIAPGKPIADALDEEIRNPRNLEEMITLFKLGLICTSTLPEIRPSMKEVLQILRQCRPQEDCNGRKNAGEFDAVPLLGTSL 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1285539 1291308 - Cp4.1LG07g02410.1 Cpe07g00201 472008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00201 880 ProSiteProfiles Leucine-rich repeat profile. 242 263 IPR001611 GO:0005515
Cpe07g00201 880 Pfam Leucine rich repeat 143 203 IPR001611 GO:0005515
Cpe07g00201 880 Pfam Leucine rich repeat 321 380 IPR001611 GO:0005515
Cpe07g00201 880 SMART LRR_typ_2 94 118 IPR003591 -
Cpe07g00201 880 SMART LRR_typ_2 190 215 IPR003591 -
Cpe07g00201 880 SMART LRR_typ_2 240 260 IPR003591 -
Cpe07g00201 880 SMART LRR_typ_2 367 391 IPR003591 -
Cpe07g00201 880 Gene3D Ribonuclease Inhibitor 320 405 IPR032675 -
Cpe07g00201 880 Gene3D Ribonuclease Inhibitor 180 256 IPR032675 -
Cpe07g00201 880 Gene3D Transferase(Phosphotransferase) domain 1 477 595 - -
Cpe07g00201 880 Gene3D Transferase(Phosphotransferase) domain 1 601 860 - -
Cpe07g00201 880 SMART serkin_6 617 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00201 880 SMART serkin_6 396 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00201 880 Pfam Protein kinase domain 398 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00201 880 Pfam Protein kinase domain 619 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00201 880 ProSiteProfiles Protein kinase domain profile. 396 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00201 880 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 610 803 - -
Cpe07g00201 880 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 15 253 - -
Cpe07g00201 880 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 253 388 - -
Cpe07g00201 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 753 765 IPR008271 GO:0004672|GO:0006468
Cpe07g00201 880 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 389 582 - -
Cpe07g00201 880 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 804 870 - -
Cpe07g00201 880 SUPERFAMILY RNI-like 50 396 - -
Cpe07g00201 880 Gene3D Phosphorylase Kinase; domain 1 406 476 - -
Cpe07g00201 880 Gene3D Ribonuclease Inhibitor 257 319 IPR032675 -
Cpe07g00201 880 ProSiteProfiles Protein kinase domain profile. 617 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00201 880 Pfam Leucine Rich Repeat 120 140 IPR001611 GO:0005515
Cpe07g00201 880 Pfam Leucine Rich Repeat 242 272 IPR001611 GO:0005515
Cpe07g00201 880 SUPERFAMILY Protein kinase-like (PK-like) 604 852 IPR011009 -
Cpe07g00201 880 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 610 803 - -
Cpe07g00201 880 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 15 253 - -
Cpe07g00201 880 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 253 388 - -
Cpe07g00201 880 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Cpe07g00201 880 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 389 582 - -
Cpe07g00201 880 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 804 870 - -
Cpe07g00201 880 SUPERFAMILY Protein kinase-like (PK-like) 387 582 IPR011009 -
Cpe07g00201 880 Gene3D Ribonuclease Inhibitor 33 179 IPR032675 -
Cpe07g00201 880 ProSitePatterns Protein kinases ATP-binding region signature. 623 646 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01095 Cpe-Chr4:9522504 Cpe07g00201 Cpe-Chr7:1285539 2.68E-11 dispersed
Cpe07g00201 Cpe-Chr7:1285539 Cpe04g01569 Cpe-Chr4:12287161 2.11E-15 dispersed
Cpe07g00201 Cpe-Chr7:1285539 Cpe18g00398 Cpe-Chr18:5198861 8.71E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62494 PF00069 Pkinase 9.20E-34 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00201 - K00924 ini:109171064 543.888