Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00219 ATGGCCAAGATTGCATTGGGATGCGTTGGCGAGGCGACTCAGCCCGACTGCATCCGAGCCCTCGTCGTCGAGTTCATCACCACCTTCCTCTTCGTCTTTGTTGGTGTCGGATCAGCCATAACTGCTAATACACTACTAGGAAATGCACTCGTGGGATTGTTCTCTGTCGCTGTCGCACATGCGCTGGTCGTGGCTGTGATGATCTCCGCCGGACACATTTCCGGTGGTCACCTAAACCCCGCCGTCACACTCGGTCTCCTTTTTGGTGGTCATATCACAGTTGTCCGATCCGCTTTATATTGGATCATTCAGTTGCTAGCAGCGTCTGCAGCTAGTTTTCTGTTATCGTACCTCACCGGAGGCTCCGCTATTCCAGTTCACACATTAGCAAGTGGAGTTGGCTATCTTCAAGGAGTGATATGGGAGATTATTCTCACTTTCTCCTTGCTGTTCACTGTCTACGCAACAATGGTTGATCCAAAGAAGGGAGCTCTTGATGGGTTGGGTCCAATGTTGACTGGGTTCGTGGTGGGGGCTAACATCTTGGCTGGTGGGGCCTTTTCTGGAGCTTCAATGAACCCAGCAAGATCATTTGGCCCAGCTTTGGTGGCTGGAGACTGGACTGACCACTGGGTTTACTGGGTTGGACCTCTTATTGGTGGTGGACTTGCTGGGTTCATCTATGAAAATTTCTTCATTGAGAGGTCTCATGTGCCTCTGCCTAGGGCAGAGGCTGAGTATTAA 744 51.08 MAKIALGCVGEATQPDCIRALVVEFITTFLFVFVGVGSAITANTLLGNALVGLFSVAVAHALVVAVMISAGHISGGHLNPAVTLGLLFGGHITVVRSALYWIIQLLAASAASFLLSYLTGGSAIPVHTLASGVGYLQGVIWEIILTFSLLFTVYATMVDPKKGALDGLGPMLTGFVVGANILAGGAFSGASMNPARSFGPALVAGDWTDHWVYWVGPLIGGGLAGFIYENFFIERSHVPLPRAEAEY 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1415743 1417143 - Cp4.1LG07g02270.1 Cpe07g00219 472026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00219 247 Pfam Major intrinsic protein 12 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe07g00219 247 PANTHER AQUAPORIN TIP4-1 2 245 - -
Cpe07g00219 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe07g00219 247 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe07g00219 247 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe07g00219 247 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe07g00219 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe07g00219 247 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe07g00219 247 SUPERFAMILY Aquaporin-like 13 241 IPR023271 -
Cpe07g00219 247 Gene3D Glycerol uptake facilitator protein. 2 243 IPR023271 -
Cpe07g00219 247 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Cpe07g00219 247 PANTHER AQUAPORIN-8 2 245 IPR034294 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00219 Cpe-Chr7:1415743 Cpe17g00544 Cpe-Chr17:4517086 4.16E-83 dispersed
Cpe07g00219 Cpe-Chr7:1415743 Cpe10g00246 Cpe-Chr10:1431950 6.00E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00219 K09873 - csv:101205380 429.483