Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00241 ATGTGGACTCAGAAATATGCAAAGGAAAGGAAAGAGGTGGTGGTCGCCAGCAACCAATTGGTCGGAATCGCCATTGACAAGGATAAAGGAAGCCAAAATGCTCTCAAATGGGCTACTGAGAATCTCCTTCAAAAGGGCCAAACCGCCATTCTTATCCATGTCAAGCTCAGATCTTCGTCCCATTCAGGTTCTTCTTATGCTTCCTCTGATTTGATGTCCAACAATGGCAGTGGCAATGTTTTAGTAAGCAACGAAATCGACCCGAGCACGAGGGATTTGTTCCTTCCTTTTCGATGCTTCTGCACCCGGAAAGATATATTCTGCAAAGACATTGTTATTGAAGATGTAGATGTTGCAAAAGCATTGATTGAATATGTCACTCAAGCTGGAATCGACACTTTGATCGTCGGTACCACGACTAAAAGTGGCTTCTTGAGATTCAAAACGACAGATATTCCAGGCACAATTCTCAAAGGAGCACCAGATTTCTGCAATGTTTATGTCATATCAAGAGGGAAGATCCAAACTATGCGATCGGCCTCACGTCCCGCTCCAACTTCTTCGCCTCTACGAAACTTTTTGCTAAACCAATCCGGTATCAAATCGCAATCATCGGACTCGCAAAAGCCTCAGATTCAAAGACCGGAAAAGCCTCCCATCGAACCAGCACGAAGATCACACGAAAACATCGAGTTCAGGTCTCCATTCACTAGGAAAGGTTACAATGGCAAAATGCCAGGGGAAATGAGTGTGCCGGATACTGATATTTCTTTTGTTGGCTCGGGAAGGCCGAGCGTCGACAAATTGTTCCCGACATACTATGATGCCGTGGATCCAGGACGAATGCCCCCACGACTGTCGAATGGCACCGATGGTGATATATATCATAGCTTTGAATCGCAGCCGTTCGGACGCAAATCATTGGATGTAAACTTACAAGAATTTTCATCGATCTTCTCGGAAGGCGAAAGATTATCGACTTCGTCACAGAGTATGGAAGAACGGAGAATCGAGGAGGCTAGACTTGCTGAGGAAGCTGCATTAGCGATGGTCGAGCAGGAAAAGGCGAAGTCTCGAGCGGCTATGGAGGCTGCTGAAGCATCTAAACGGATCGCGGAGTTGGAAGCACAAAAGAGAATTAACGCGGAAATTAAAGCATTCAAGGAAGCAGAAGAGAAAAAGAAGGCATTGGATGCATTGGCAAACAACGACGTTAGGTATCGGAGGTACACGATCGAGGAGATCGAAGCTGCTACCGAGTTCTTCTCGGAATCTTTGAAGATTGGAGAGGGAGGCTATGGACCTGTTTACAAGGGTTATTTGGATCACACACCTGTTGCCATTAAGGTCTTACGTCCAGATGCAGCTCAAGGAAGGTCACAGTTCCAACAAGAGGTCGAAGTACTAAGCTGCATCCGACATCCGAACATGGTTCTTCTCCTCGGAGCATGCCCCGAGTACGGCTGCTTGGTCTACGAGTTCATGGCAAATGGTAGCTTGGACGATTGCCTCTTTCGTCGTAAAGAAAAGTCGAAACCTCTTTCTTGGCAACTTAGATTCAAAATTGCAGCTGAAATCGGCACGAGCTTGTTGTTCCTCCACCAGACTAAGCCCGAGCCACTCGTGCACCGTGACTTGAAGCCAGCCAACATCTTGCTCGATTTTAACTACGTTAGCAAGATTAGCGACGTTGGTTTGGCTAGGCTTGTTCCCCCATCGGTAGCAGATAGTGTGACACAATATAGAATGACGTCAACTGCTGGCACGTTCTGCTATATCGATCCCGAGTATCAACAAACCGGTATGCTCGGTGTAAAGTCCGACATATATTCTTTAGGAATCATGTTTCTTCAGCTGATTACAGCAAAACCACCCATGGGATTGACTCACCATGTCGGAAGAGCCATTGAGAAAGGGAATTTGTCTGAACTTCTTGATCCATCTGTTCTTGATTGGCCAGCTGAAGAAACCTTATGCTTTGCAGAGTTGGCTTTAAAATGTGCCGAGTTGAGAAGGAAAGATCGACCCGATCTTAGTAAGACCGTTCTTCCCGAGCTCATCAGATTACGATCGGTAGCCGAAGCGAGCTTGTATTCGTCGGACAAGGATGGCGTTTAG 2118 46.51 MWTQKYAKERKEVVVASNQLVGIAIDKDKGSQNALKWATENLLQKGQTAILIHVKLRSSSHSGSSYASSDLMSNNGSGNVLVSNEIDPSTRDLFLPFRCFCTRKDIFCKDIVIEDVDVAKALIEYVTQAGIDTLIVGTTTKSGFLRFKTTDIPGTILKGAPDFCNVYVISRGKIQTMRSASRPAPTSSPLRNFLLNQSGIKSQSSDSQKPQIQRPEKPPIEPARRSHENIEFRSPFTRKGYNGKMPGEMSVPDTDISFVGSGRPSVDKLFPTYYDAVDPGRMPPRLSNGTDGDIYHSFESQPFGRKSLDVNLQEFSSIFSEGERLSTSSQSMEERRIEEARLAEEAALAMVEQEKAKSRAAMEAAEASKRIAELEAQKRINAEIKAFKEAEEKKKALDALANNDVRYRRYTIEEIEAATEFFSESLKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLDDCLFRRKEKSKPLSWQLRFKIAAEIGTSLLFLHQTKPEPLVHRDLKPANILLDFNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITAKPPMGLTHHVGRAIEKGNLSELLDPSVLDWPAEETLCFAELALKCAELRRKDRPDLSKTVLPELIRLRSVAEASLYSSDKDGV 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1560646 1565794 + Cp4.1LG07g02200.1 Cpe07g00241 472048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00241 705 CDD STK_N 20 172 - -
Cpe07g00241 705 ProSiteProfiles Protein kinase domain profile. 422 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00241 705 Gene3D HUPs 19 169 IPR014729 -
Cpe07g00241 705 SMART serkin_6 422 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00241 705 Pfam Protein kinase domain 424 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00241 705 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 23 170 - -
Cpe07g00241 705 Gene3D Transferase(Phosphotransferase) domain 1 495 702 - -
Cpe07g00241 705 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 333 701 - -
Cpe07g00241 705 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 13 334 - -
Cpe07g00241 705 SUPERFAMILY Protein kinase-like (PK-like) 405 680 IPR011009 -
Cpe07g00241 705 PANTHER OS02G0152300 PROTEIN 333 701 - -
Cpe07g00241 705 PANTHER OS02G0152300 PROTEIN 13 334 - -
Cpe07g00241 705 MobiDBLite consensus disorder prediction 200 230 - -
Cpe07g00241 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Cpe07g00241 705 Coils Coil 348 377 - -
Cpe07g00241 705 Gene3D Phosphorylase Kinase; domain 1 400 494 - -
Cpe07g00241 705 Pfam Universal stress protein family 21 152 IPR006016 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00241 Cpe-Chr7:1560646 Cpe07g00774 Cpe-Chr7:6846738 0 dispersed
Cpe11g00543 Cpe-Chr11:3218026 Cpe07g00241 Cpe-Chr7:1560646 0 wgd
Cpe02g00393 Cpe-Chr2:2180776 Cpe07g00241 Cpe-Chr7:1560646 0 wgd
Cpe06g00402 Cpe-Chr6:2284190 Cpe07g00241 Cpe-Chr7:1560646 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62497 PF00069 Pkinase 5.10E-38 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00241 - - csv:101214468 1062.37