Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00251 ATGGGCGGCGATAAGGCCATCACTCTTGAGGAGATCAAAAACGAGGCCGTTGATCTGGAACATATTCCAATAGAGGAAGTGTTCGAACAGTTGAAATGTACACGAGAAGGTCTGACGTCAGAGGAAGGAGCCCACCGGCTTCAAGTTTTCGGACCCAACAAACTAGAAGAGAAGAAGGAAAGCAAACTCCTCAAGTTTTTGGGTTTCATGTGGAATCCTTTATCTTGGGTTATGGAAGCTGCTGCCTTAATGGCTATAGTCTTGGCAAATGGTGGTGGAAGACCACCAGACTGGCAAGACTTTGTGGGGATCATTGCTTTACTTTTTATCAACTCTACCATAAGTTTTATTGAAGAAAACAATGCTGGTAACGCGGCTGCAGCACTCATGGCTGGTCTTGCTCCCAAAACTAAGGTTCTAAGAGATGGTCGTTGGAGTGAGCAAGAGGCTGCTATTCTTGTTCCTGGAGATATTATCAGCATTAAGCTTGGGGATATAATACCAGCAGATGCCCGTCTTCTGGAGGGTGATCCTTTAAAGATTGATCAATCTGCTTTAACTGGAGAATCACTCCCAGTCACCAAGAACCCTTCAGATGAAGTATTTTCTGGTTCTACATGTAAACAGGGTGAAATAGAAGCAGTCGTGATTGCCACTGGTGTCCACACATTTTTCGGCAAAGCTGCTCATTTGGTAGATAGCACCAATCAAGTTGGACATTTCCAGAAAGTTCTTACTGCTATTGGTAATTTCTGTATTTGCTCAATCGCCGTTGGAATACTAATCGAACTCATAGTCATGTACCCAATACAACGACGCAAGTATCGAGATGGAATTGACAATTTACTGGTGCTTTTGATTGGTGGAATTCCTATTGCAATGCCAACCGTTTTGTCTGTTACAATGGCCATTGGCTCTCATAGGCTTTCTCAGCAGGGTGCCATTACAAAGAGAATGACAGCCATTGAAGAAATGGCTGGCATGGATGCTCCGAGAATTGCACACACTGAAGGGGCATGTGGAATCAGTAGTGAAGCTGAAAGGACTTGA 1050 44.1 MGGDKAITLEEIKNEAVDLEHIPIEEVFEQLKCTREGLTSEEGAHRLQVFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAALMAIVLANGGGRPPDWQDFVGIIALLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGILIELIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDAPRIAHTEGACGISSEAERT 349
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 1633612 1641807 + Cp4.1LG07g02070.1 Cpe07g00251 472058
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00251 349 Pfam E1-E2 ATPase 134 311 - -
Cpe07g00251 349 Gene3D - 135 219 - -
Cpe07g00251 349 Pfam Cation transporter/ATPase, N-terminus 21 84 IPR004014 -
Cpe07g00251 349 PANTHER PLASMA MEMBRANE ATPASE 1 330 - -
Cpe07g00251 349 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Cpe07g00251 349 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 104 329 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe07g00251 349 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Cpe07g00251 349 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 327 IPR023298 -
Cpe07g00251 349 Gene3D - 97 328 - -
Cpe07g00251 349 PANTHER CALCIUM-TRANSPORTING ATPASE 1 330 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00251 Cpe-Chr7:1633612 Cpe11g00633 Cpe-Chr11:4054155 0 dispersed
Cpe02g00405 Cpe-Chr2:2256217 Cpe07g00251 Cpe-Chr7:1633612 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00251 K01535 - csv:101213505 615.535