Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe07g00251 | ATGGGCGGCGATAAGGCCATCACTCTTGAGGAGATCAAAAACGAGGCCGTTGATCTGGAACATATTCCAATAGAGGAAGTGTTCGAACAGTTGAAATGTACACGAGAAGGTCTGACGTCAGAGGAAGGAGCCCACCGGCTTCAAGTTTTCGGACCCAACAAACTAGAAGAGAAGAAGGAAAGCAAACTCCTCAAGTTTTTGGGTTTCATGTGGAATCCTTTATCTTGGGTTATGGAAGCTGCTGCCTTAATGGCTATAGTCTTGGCAAATGGTGGTGGAAGACCACCAGACTGGCAAGACTTTGTGGGGATCATTGCTTTACTTTTTATCAACTCTACCATAAGTTTTATTGAAGAAAACAATGCTGGTAACGCGGCTGCAGCACTCATGGCTGGTCTTGCTCCCAAAACTAAGGTTCTAAGAGATGGTCGTTGGAGTGAGCAAGAGGCTGCTATTCTTGTTCCTGGAGATATTATCAGCATTAAGCTTGGGGATATAATACCAGCAGATGCCCGTCTTCTGGAGGGTGATCCTTTAAAGATTGATCAATCTGCTTTAACTGGAGAATCACTCCCAGTCACCAAGAACCCTTCAGATGAAGTATTTTCTGGTTCTACATGTAAACAGGGTGAAATAGAAGCAGTCGTGATTGCCACTGGTGTCCACACATTTTTCGGCAAAGCTGCTCATTTGGTAGATAGCACCAATCAAGTTGGACATTTCCAGAAAGTTCTTACTGCTATTGGTAATTTCTGTATTTGCTCAATCGCCGTTGGAATACTAATCGAACTCATAGTCATGTACCCAATACAACGACGCAAGTATCGAGATGGAATTGACAATTTACTGGTGCTTTTGATTGGTGGAATTCCTATTGCAATGCCAACCGTTTTGTCTGTTACAATGGCCATTGGCTCTCATAGGCTTTCTCAGCAGGGTGCCATTACAAAGAGAATGACAGCCATTGAAGAAATGGCTGGCATGGATGCTCCGAGAATTGCACACACTGAAGGGGCATGTGGAATCAGTAGTGAAGCTGAAAGGACTTGA | 1050 | 44.1 | MGGDKAITLEEIKNEAVDLEHIPIEEVFEQLKCTREGLTSEEGAHRLQVFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAALMAIVLANGGGRPPDWQDFVGIIALLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGILIELIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDAPRIAHTEGACGISSEAERT | 349 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1633612 | 1641807 | + | Cp4.1LG07g02070.1 | Cpe07g00251 | 472058 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe07g00251 | 349 | Pfam | E1-E2 ATPase | 134 | 311 | - | - | |
| Cpe07g00251 | 349 | Gene3D | - | 135 | 219 | - | - | |
| Cpe07g00251 | 349 | Pfam | Cation transporter/ATPase, N-terminus | 21 | 84 | IPR004014 | - | |
| Cpe07g00251 | 349 | PANTHER | PLASMA MEMBRANE ATPASE | 1 | 330 | - | - | |
| Cpe07g00251 | 349 | SMART | Cation_ATPase_N_a_2 | 18 | 90 | IPR004014 | - | |
| Cpe07g00251 | 349 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 104 | 329 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Cpe07g00251 | 349 | SUPERFAMILY | Calcium ATPase, transduction domain A | 135 | 232 | IPR008250 | - | |
| Cpe07g00251 | 349 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 18 | 327 | IPR023298 | - | |
| Cpe07g00251 | 349 | Gene3D | - | 97 | 328 | - | - | |
| Cpe07g00251 | 349 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 330 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe07g00251 | Cpe-Chr7:1633612 | Cpe11g00633 | Cpe-Chr11:4054155 | 0 | dispersed | |
| Cpe02g00405 | Cpe-Chr2:2256217 | Cpe07g00251 | Cpe-Chr7:1633612 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe07g00251 | K01535 | - | csv:101213505 | 615.535 |