Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00263 ATGATGAAAGAACTTAAGTTTGCCGTCAGAATCACACGCTCCCAGTCTAATTCCTTGAGTAGACTGGAAGCTACTTCACCCTCGTTACAAGTTTCACTCAAAAAACTGCGCAAACGCGGTCATGCCGAAAACTCTGAACGAGCACAACTGGATGGAAGCAATGCTCCTACAACTATCACTATTGGCCTTCGGCGCAAAAGAAGAGCAGTGCTCAAGGATGTTACTAACATGTCCTGTGAGAGCAATAATCTGGGTTGCTTGCATGCTTCAAAAATTCAGGTACATGAGGTCATACAGATCGAATCACTTGAAGATTTACCCATTAAAAGGACGGCTGAATCACAAGTTACCTTTCCAATGATGAGGCCAGACAAAAAAGAGACAGCACAGAAGAACAAGTTTCAGACTGTCATAGGATGCACAAATGCTGCGTTTCCCAAGTCTTCGGGATTAAAAGACCACCAAATGAAAGATGAGGCTCGAGTTTGTGATAAACTAAACCATCTCGGTACATCGGATGTTGTTTCAATCTCAGAAGATCCTCAAGCATGCACACTATATGCCCATAACATATATGATATCAATCGTGTAATAGAGCTTGATCAAAGGCCTTCTACTAATTATATGGAAAAGTTACAGAAATATATCACTCCAATCATGCGAGGGATTCTAATTGATTGGTTAGTTGAGGTTTCTGAAGAATATAAACTCGTCTCTGACACACTTTACCTCACCGTGAATCTCATCGATCGATTTCTCTCTCAAAGTTGCATCGAAAGGCATAGATTACAACTCCTTGGTGTCAGTTGCATGTTAATCGCCTCTAAATATGAAGAAGTATGTGCACCATTTGTGGAAGAGTTTTGCTGCATCACGGACAACACCTATACGAGAGGAGAGCTCTCTGTTCCCACTACAAAAACATTTCTCAGGAGATTTGTGCAGGTAGCACCGGCTTCTTGCAAGGAACCTCACAACGAGTTCGAGCATTTGACGAATTATCTAGCAGAATTGACTCTTGGCGAGTACAGCTTTCTGAAGTTTCTGCCATCAGCAGTGGCTGCATCTGTGGTGTTCTTAGCCAAATGGATTCTGAATCAACCAAATCACCCATGGAATCCAAGTCTAGAACAGTATACAAATTACAGTGTCTCCCAGCTAAAAGCTCCAGTACTTGCCTTAGAACATCTAAGATTGAACTCCTCAACTTGCCCTTTCAACGCCATCTTTCACAAGTACAGACAACACAAGTTTGGAAGCGTGGCGACTTTAACCCCCACAATACCAGTTCTCTCAGCTTTCCAAAACCAGACAGATTCCTAA 1323 42.33 MMKELKFAVRITRSQSNSLSRLEATSPSLQVSLKKLRKRGHAENSERAQLDGSNAPTTITIGLRRKRRAVLKDVTNMSCESNNLGCLHASKIQVHEVIQIESLEDLPIKRTAESQVTFPMMRPDKKETAQKNKFQTVIGCTNAAFPKSSGLKDHQMKDEARVCDKLNHLGTSDVVSISEDPQACTLYAHNIYDINRVIELDQRPSTNYMEKLQKYITPIMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRFLSQSCIERHRLQLLGVSCMLIASKYEEVCAPFVEEFCCITDNTYTRGELSVPTTKTFLRRFVQVAPASCKEPHNEFEHLTNYLAELTLGEYSFLKFLPSAVAASVVFLAKWILNQPNHPWNPSLEQYTNYSVSQLKAPVLALEHLRLNSSTCPFNAIFHKYRQHKFGSVATLTPTIPVLSAFQNQTDS 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1707425 1713290 - Cp4.1LG07g01840.1 Cpe07g00263 472070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00263 440 SMART cyclin_7 308 396 IPR013763 -
Cpe07g00263 440 SMART cyclin_7 226 302 IPR013763 -
Cpe07g00263 440 Gene3D - 204 302 - -
Cpe07g00263 440 SMART Cyclin_C_2 304 427 IPR004367 -
Cpe07g00263 440 PANTHER CYCLINS 47 424 IPR039361 -
Cpe07g00263 440 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
Cpe07g00263 440 CDD CYCLIN 302 383 IPR013763 -
Cpe07g00263 440 PIRSF Cyclin_A_B_D_E 6 438 IPR039361 -
Cpe07g00263 440 Pfam Cyclin, N-terminal domain 191 300 IPR006671 -
Cpe07g00263 440 CDD CYCLIN 220 301 IPR013763 -
Cpe07g00263 440 SUPERFAMILY Cyclin-like 179 301 IPR036915 -
Cpe07g00263 440 Gene3D - 191 423 - -
Cpe07g00263 440 PANTHER CYCLIN-A2-4 47 424 - -
Cpe07g00263 440 SUPERFAMILY Cyclin-like 303 426 IPR036915 -
Cpe07g00263 440 Pfam Cyclin, C-terminal domain 304 426 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00263 Cpe-Chr7:1707425 Cpe17g00601 Cpe-Chr17:4969863 3.68E-102 dispersed
Cpe12g00714 Cpe-Chr12:6723254 Cpe07g00263 Cpe-Chr7:1707425 3.05E-103 wgd
Cpe02g00434 Cpe-Chr2:2437300 Cpe07g00263 Cpe-Chr7:1707425 1.06E-122 wgd
Cpe06g00355 Cpe-Chr6:1977645 Cpe07g00263 Cpe-Chr7:1707425 2.77E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00263 K06627 - csv:101211578 677.937