Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00280 ATGGGGGCTCCATTCGATGGAATAGTAAAAGATATCAAGGGGAGGGCAGCCTGCTATAAGCAGGACTGGACATGTGCACTATGTTCGGGCGTCAGGATTTTAGCTCCTACTATGTACATATTCTTCGCCTCTGCCATTCCTGTCATTGCCTTCGGGGAGCAATTTAGTAGGGATACAGGTGGAAGACTGAGCACAGTGGAATCATTAGCCTCAACCGCGATTTGTGGAATTATCCACTCAATATTTGGGGGACAGCCTTTGCTGATTTTAGGAGTGGCAGAACCAACAGTTATAATGTACACTTACTTGTACAGTTTCAGCAAAGGCCGGCCGGAGTTAGGAGCCGAGCTCTTTTTAGCCTGGGCTGGATGGGTTTGCGTTTGGTCGGGACTTTTCTTGATTCTCCTTGCAATCTTTAATGCTTGCGACATTATCACCAAATTTACAAGAGTTGCGGGGGAACTGTTTGGCATGCTTATTGCTGTTCTTTTCTTCCAAGAGGCAATAAAGGGATTGATCAGCGAGTTCAATGCTCCCAAATCAGAAAATCCAGAGCCATTGGACTTAAAATTTGAATGGTTGTATGCAAATGGGTTGCTTGCCATCATTTTTGCCAACGGGGTACTCTTTTCAGCCCTGAAAAGCAGACATGCGAGATCGTGGAAATATGGCACTGGCTGGTTTCGCAGTTTCATTGCAGACTATGGGGTTCCACTTGTGATCGTGTTATGGACAGCATTATCTTATGGAGTCCCCAGCAAAGCTCCCGATGGAGTTCCGAGGAGACTCTTTTGTCCATTACCTTGGGAGCCGGCTTCAATGTACCATTGGACTGTAGCCAAGGACATGGGGAAGGTTCCAATGATTTACATCCTTGCTGCTGCTCTGCCAGCCCTGATGATAGCAGGCCTTTACTTTTTTGACCATAGTGTTGCATCACAAATGGCGCAGCAGAAAGAGTTTAATCTTCAAAAACCATCTGCATATCATTATGATGTCTTCTTGCTCGGGATTATGAGTGCACAGGAATGTATCAAACTAAAAGCAAGCAACTCTGAAGTTTATGGAAAGATGCAGGCGGCGTTCTCTGAAATAGACGCATCTCCAACTCCTAAAGAGCTTGAGACCTTGACGAAGGCAGTAATGAGTGCTGATGACAGTGATCACAAGGGAAAATTCGACGCCGAGAAAAATATAGATCCTTATTTGCCTGTTTGTGTGAACGAACAAAGGATGAGCAACTTGCTGCAGTCCGTCCTTGTGGCCGCATCAATATTTGCTGTCCCTATAATGAGAATGATACCCACTTCAGTTCTTTGGGGATACTTTGCTTACATGGCCATTGATAGTCTCCCAGGGAATCAGTTCTGGGAAAGGTTGTTGTTACTGTTTATCACACCGGGTCGGCGTTTCAAGGTCTTGGAGGGGTCTCATTTATCATTCGTTGAAACCGTGCCATTCAAAGTCATTGCATCGTTCACTCTCCTTCAGTTAGCATATTTCTTGTTGTGCTTTGGGATAACGTGGATACCTGTAGCTGGGATCCTGTTCCCACTGCCATTTTTCCTCCTTATTAGCATAAGAGAGCATGTGCTCCCCAAATTCTTCCAGCATAACCATCTTCAAGAGCTAGATGCCTCAGAGTATGAGGAGATTGCCGGTGCTCCACATCGGAACCTCACAGTTACGGTTCATCCTGAAAGTTCAACTCGAACATAA 1719 45.49 MGAPFDGIVKDIKGRAACYKQDWTCALCSGVRILAPTMYIFFASAIPVIAFGEQFSRDTGGRLSTVESLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLYSFSKGRPELGAELFLAWAGWVCVWSGLFLILLAIFNACDIITKFTRVAGELFGMLIAVLFFQEAIKGLISEFNAPKSENPEPLDLKFEWLYANGLLAIIFANGVLFSALKSRHARSWKYGTGWFRSFIADYGVPLVIVLWTALSYGVPSKAPDGVPRRLFCPLPWEPASMYHWTVAKDMGKVPMIYILAAALPALMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDVFLLGIMSAQECIKLKASNSEVYGKMQAAFSEIDASPTPKELETLTKAVMSADDSDHKGKFDAEKNIDPYLPVCVNEQRMSNLLQSVLVAASIFAVPIMRMIPTSVLWGYFAYMAIDSLPGNQFWERLLLLFITPGRRFKVLEGSHLSFVETVPFKVIASFTLLQLAYFLLCFGITWIPVAGILFPLPFFLLISIREHVLPKFFQHNHLQELDASEYEEIAGAPHRNLTVTVHPESSTRT 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1844904 1850051 + Cp4.1LG07g02850.1 Cpe07g00280 472087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00280 572 Gene3D Helical hairpin bin 15 56 - -
Cpe07g00280 572 PANTHER BORON TRANSPORTER 6-RELATED 3 340 - -
Cpe07g00280 572 PANTHER BORON TRANSPORTER 6-RELATED 339 564 - -
Cpe07g00280 572 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016021
Cpe07g00280 572 Pfam HCO3- transporter family 406 495 IPR011531 GO:0006820|GO:0016021
Cpe07g00280 572 Pfam HCO3- transporter family 198 341 IPR011531 GO:0006820|GO:0016021
Cpe07g00280 572 PANTHER ANION EXCHANGE PROTEIN 3 340 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cpe07g00280 572 PANTHER ANION EXCHANGE PROTEIN 339 564 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00280 Cpe11g00345 CCT
Cpe07g00280 Cpe11g00345 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01125 Cpe-Chr3:9240831 Cpe07g00280 Cpe-Chr7:1844904 0 dispersed
Cpe07g00280 Cpe-Chr7:1844904 Cpe20g00245 Cpe-Chr20:1386587 0 dispersed
Cpe11g00345 Cpe-Chr11:1871037 Cpe07g00280 Cpe-Chr7:1844904 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00280 K24194 - csv:101220188 976.081