Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00325 ATGGCTGCTCTTTTGAAAGCTCTGTTTCTTTTCGTCTTCGTCTTCTTCAGCTCGTCGGAAGCCAGAGAGATCTTGGTCGGAGGCAAAACCAACGCCTGGAAAATCCCTTCTTCTCCAGCTCAATCTCTCAATCAATGGGCCGAAAGCTCCCGGTTTCGTGTCGGCGACACTCTCGTGTGGAATTACGAGGGGAAAGATTCAGTGTTGAAAGTGAGGAAGGAAGATTACGAAGCCTGCAACATTACGAACCCACAAGAGAAACTGGAGGACGGGAACGCCAAGGTGGAGCTTCACAACCCGGGTCCGATCTACTTCATCAGTGGAGTAAAGGCTCACTGCGAGCAGGGTCTTAAGCTTGTCGTCGTCGTTATGACTCCTCGTCACAGGTTCATCGGTATCTCTCCGGCGCCTTCTCCGGCGGAGATTGAGGCTCCGGCGGTTGCTCCCTCGAGTGGCGCTGCAAGTTTGAAGGTCGGGGTTTTGGCTGTCGTGGTGGGGATTTTGGGAGCTCATATGATTTAG 522 52.87 MAALLKALFLFVFVFFSSSEAREILVGGKTNAWKIPSSPAQSLNQWAESSRFRVGDTLVWNYEGKDSVLKVRKEDYEACNITNPQEKLEDGNAKVELHNPGPIYFISGVKAHCEQGLKLVVVVMTPRHRFIGISPAPSPAEIEAPAVAPSSGAASLKVGVLAVVVGILGAHMI 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2102734 2104271 + Cp4.1LG07g03160.1 Cpe07g00325 472132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00325 173 CDD OsENODL1_like 22 124 IPR041846 -
Cpe07g00325 173 SUPERFAMILY Cupredoxins 21 124 IPR008972 -
Cpe07g00325 173 PANTHER EARLY NODULIN-LIKE PROTEIN 3 7 168 - -
Cpe07g00325 173 Gene3D - 20 127 IPR008972 -
Cpe07g00325 173 ProSiteProfiles Phytocyanin domain profile. 22 125 IPR003245 GO:0009055
Cpe07g00325 173 PANTHER BLUE COPPER PROTEIN 7 168 IPR039391 GO:0009055
Cpe07g00325 173 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00683 Cpe-Chr6:4245417 Cpe07g00325 Cpe-Chr7:2102734 2.09E-26 dispersed
Cpe07g00325 Cpe-Chr7:2102734 Cpe12g00665 Cpe-Chr12:6443138 5.92E-23 dispersed
Cpe07g00325 Cpe-Chr7:2102734 Cpe17g00141 Cpe-Chr17:880581 7.90E-19 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00325 - - csv:101210664 224.557