Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe07g00360 | ATGGAGGCCCGAATTTCATTCCTGTTGGGTGTTTCGATTCTGATGCTTTTGCTACCAGGCGGGTTTCCGACGAGCTTTACTTTTGTGAACAAATGTGGATTCACAGTCTGGCCGGGTATTCTGTCGAACGGTGGCGTTCCGCCGCTTTCCACCACTGGTTTCTCTCTCGAGTCTGGAGAATCCAAGACGCTGCCTGCGCCGATGTCTTGGGGCGGGCGGTTCTGGGGCCGAACACTCTGTTCTGAAGATTCCACCGGGAAATTCACCTGCGGTACTGGCGATTGTGGCTCCGACAAACTTGAGTGCACCGGAAATGGAGCGACGCCTCCGGCGACTCTGGCGGAATTTACACTCGACGGCTCTGGTGGCCTTGATTTCTTCGACGTCAGTCTGGTCGACGGTTACAATCTTCCGATGATGGTAGTGCCACAAGGCGGCTCCGGTGACAATTGCACTAGCACCGGCTGCGTTGTGGATCTAAACGATGCGTGTCCTTCGGAGCTGCGCGTGATGGGCTCCGACGGAAGAGAGGGTGTCGCGTGTAAAAGCGCGTGTGGTGCCTTCAACCAACCGCAGTATTGTTGTACAGGCGCGTACCAAACACCGGATACTTGTCAGCCGTCGATGTACTCTCAGATCTTCAAGAAAGCGTGCCCACGCGCTTATAGCTACGCGTACGATGACAAGACGAGTACCTTCACATGCGCCAGTGCCGATTATGTCATCACCTTCTGTCCATCGCCAAACACCAGCCAAAAGTCATCCGAGGCACAGAACTCACCGGCGACGGCGAACCCATCTTCCAGCGGCGATGTTGGTATGGTGTACGAAGCCGCATCCCTGATCCAAACCGACGCAGCGCCGCCGCGTATCGCCGGAATATCAGCGGTTGGTACGGTGGCGATTTGGTGGTTATGGCAATTATGCGATTACACTGTTTGGCCGGGAATTCTCGGCAATACCCAATTGGAATCTACTGGATTCGAGCTTTCTTCGGGGGCGGCGCGTTCACTCCACGCGCTTCCAGGGTGGTCCGGCAGATTCTGGGGTCGGACCGGCTGTTTGTTCGACCCAGCCACTAGTCAGGGCAGCTGCCAGACTGCTGACTGTGGATCAAATCAAATGGAATGCAATGGCGCCGGAGCAACGCCGCCGGCTACTCTGGCTGAGTTCACAATCGGCGCCAGTGCCAGTGCGCAGGACTTTTATGACGTCAGCTTGGTCGACGGCTACAACATTCCGATGGTTATTGAGGCCACCGGCGGTAACGGCGAGTGTCAGTTGACTGGGTGTGCGGCGGATTTGAACCAGCGTTGCCCTGTGGAGCTGCGTGCCGGCGATGGGAAGGCGTGCAGGAGTGCGTGTGAGGCGTTTGGGAAACCGGAGTATTGCTGTAGCGGCGCGTTTAATTCACCCGCCGCCTGTAAGCCGTCGGTGTACTCGGAAATTTTCAAATCAGCTTGCCCCAAAGCATATAGCTATGCCTTTGATGATGCAACAAGCACTTTTACTTGCAGTGGTGCTGATTACACCATTACATTCTGCCCTTCATCAAGGTAA | 1560 | 55.71 | MEARISFLLGVSILMLLLPGGFPTSFTFVNKCGFTVWPGILSNGGVPPLSTTGFSLESGESKTLPAPMSWGGRFWGRTLCSEDSTGKFTCGTGDCGSDKLECTGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNLPMMVVPQGGSGDNCTSTGCVVDLNDACPSELRVMGSDGREGVACKSACGAFNQPQYCCTGAYQTPDTCQPSMYSQIFKKACPRAYSYAYDDKTSTFTCASADYVITFCPSPNTSQKSSEAQNSPATANPSSSGDVGMVYEAASLIQTDAAPPRIAGISAVGTVAIWWLWQLCDYTVWPGILGNTQLESTGFELSSGAARSLHALPGWSGRFWGRTGCLFDPATSQGSCQTADCGSNQMECNGAGATPPATLAEFTIGASASAQDFYDVSLVDGYNIPMVIEATGGNGECQLTGCAADLNQRCPVELRAGDGKACRSACEAFGKPEYCCSGAFNSPAACKPSVYSEIFKSACPKAYSYAFDDATSTFTCSGADYTITFCPSSR | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 2326165 | 2331321 | - | Cp4.1LG07g03580.1 | Cpe07g00360 | 472167 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe07g00360 | 519 | Gene3D | Thaumatin | 24 | 246 | IPR037176 | - | |
| Cpe07g00360 | 519 | Gene3D | Thaumatin | 306 | 516 | IPR037176 | - | |
| Cpe07g00360 | 519 | SMART | tha2 | 309 | 516 | IPR001938 | - | |
| Cpe07g00360 | 519 | SMART | tha2 | 26 | 246 | IPR001938 | - | |
| Cpe07g00360 | 519 | MobiDBLite | consensus disorder prediction | 250 | 269 | - | - | |
| Cpe07g00360 | 519 | CDD | TLP-PA | 25 | 245 | - | - | |
| Cpe07g00360 | 519 | PANTHER | OS03G0233200 PROTEIN | 9 | 262 | IPR001938 | - | |
| Cpe07g00360 | 519 | SUPERFAMILY | Osmotin, thaumatin-like protein | 25 | 247 | IPR037176 | - | |
| Cpe07g00360 | 519 | CDD | TLP-PA | 309 | 515 | - | - | |
| Cpe07g00360 | 519 | PANTHER | PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN | 305 | 518 | - | - | |
| Cpe07g00360 | 519 | PANTHER | PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN | 9 | 262 | - | - | |
| Cpe07g00360 | 519 | ProSiteProfiles | Thaumatin family profile. | 309 | 516 | IPR001938 | - | |
| Cpe07g00360 | 519 | Pfam | Thaumatin family | 309 | 516 | IPR001938 | - | |
| Cpe07g00360 | 519 | Pfam | Thaumatin family | 30 | 246 | IPR001938 | - | |
| Cpe07g00360 | 519 | ProSiteProfiles | Thaumatin family profile. | 26 | 246 | IPR001938 | - | |
| Cpe07g00360 | 519 | SUPERFAMILY | Osmotin, thaumatin-like protein | 309 | 517 | IPR037176 | - | |
| Cpe07g00360 | 519 | PRINTS | Pathogenesis-related protein signature | 347 | 358 | IPR001938 | - | |
| Cpe07g00360 | 519 | PRINTS | Pathogenesis-related protein signature | 401 | 417 | IPR001938 | - | |
| Cpe07g00360 | 519 | PRINTS | Pathogenesis-related protein signature | 302 | 314 | IPR001938 | - | |
| Cpe07g00360 | 519 | PRINTS | Pathogenesis-related protein signature | 326 | 335 | IPR001938 | - | |
| Cpe07g00360 | 519 | PRINTS | Pathogenesis-related protein signature | 506 | 515 | IPR001938 | - | |
| Cpe07g00360 | 519 | PANTHER | OS03G0233200 PROTEIN | 305 | 518 | IPR001938 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe07g00360 | Cpe11g00260 | CCT | |
| Cpe02g00066 | Cpe07g00360 | CCT | |
| Cpe07g00360 | Cpe11g00260 | ECH | |
| Cpe02g00066 | Cpe07g00360 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g01439 | Cpe-Chr1:8620702 | Cpe07g00360 | Cpe-Chr7:2326165 | 3.79E-77 | dispersed | |
| Cpe07g00360 | Cpe-Chr7:2326165 | Cpe11g00261 | Cpe-Chr11:1415211 | 3.10E-90 | dispersed | |
| Cpe10g00668 | Cpe-Chr10:3853700 | Cpe07g00360 | Cpe-Chr7:2326165 | 8.32E-101 | wgd | |
| Cpe11g00260 | Cpe-Chr11:1408672 | Cpe07g00360 | Cpe-Chr7:2326165 | 1.35E-81 | wgd | |
| Cpe16g00306 | Cpe-Chr16:4963336 | Cpe07g00360 | Cpe-Chr7:2326165 | 1.91E-76 | wgd | |
| Cpe19g00864 | Cpe-Chr19:6375834 | Cpe07g00360 | Cpe-Chr7:2326165 | 8.96E-94 | wgd | |
| Cpe02g00066 | Cpe-Chr2:340568 | Cpe07g00360 | Cpe-Chr7:2326165 | 9.65E-80 | wgd | |
| Cpe06g00061 | Cpe-Chr6:313847 | Cpe07g00360 | Cpe-Chr7:2326165 | 4.02E-80 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe07g00360 | - | - | csv:101204094 | 576.63 |